Gene: AT1G63780

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G63780
  • Transcript Identifier AT1G63780.1
  • Gene Type Coding gene
  • Location Chr1 : 23665045-23667243 : negative

Gene Family Information

  • ID HOM05D004477
  • #Genes/#Species 161/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G63780.1
  • symbol IMP4
  • uniprot Q9S826

Descriptions

  • Description Ribosomal RNA processing Brix domain protein
  • Computational description IMP4; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT4G01560.1); Has 804 Blast hits to 801 proteins in 232 species: Archae - 12; Bacteria - 0; Metazoa - 253; Fungi - 267; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0006364
IBA
TAS
Gene OntologyrRNA processing1 2
GO:0006364
IEA
InterProrRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030515
IBA
Gene OntologysnoRNA binding2
GO:0019843
IEA
GOA DatabaserRNA binding
GO:0019843
IEA
InterProrRNA binding
GO:0042134
IEA
Gene OntologyrRNA primary transcript binding
GO:0042134
IEA
InterProrRNA primary transcript binding
GO:0003729
IDA
Gene OntologymRNA binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IBA
TAS
Gene Ontologynucleolus1 2
GO:0034457
IBA
Gene OntologyMpp10 complex2
GO:0005634
ISM
Gene Ontologynucleus
GO:0032040
IBA
Gene Ontologysmall-subunit processome2
GO:0016363
IDA
Gene Ontologynuclear matrix1
GO:0015030
TAS
Gene OntologyCajal body1
GO:0005732
TAS
Gene Ontologysno(s)RNA-containing ribonucleoprotein complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044281 U3 snoRNP protein/Ribosome production factor 1
IPR007109 Brix domain
Mapman id Description
17.1.3.2.1.1.2 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.MPP10 module.assembly factor (Imp4)