Gene: Sopen11g025700

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g025700
  • Transcript Identifier Sopen11g025700.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 61299462-61306818 : positive

Gene Family Information

  • ID HOM05D004477
  • #Genes/#Species 161/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g025700.1

Descriptions

  • Description Small nucleolar ribonucleoprotein protein involved in ribosomal RNA processing. Located in nucleolus and cajal bodies. | IMP4 | CONTAINS InterPro DOMAIN/s: Brix domain | BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
InterProrRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042134
IEA
InterProrRNA primary transcript binding
GO:0019843
IEA
InterProrRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G63780

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015030
ISO
PLAZA Integrative OrthologyCajal body AT1G63780
GO:0016363
ISO
PLAZA Integrative Orthologynuclear matrix AT1G63780
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G63780
GO:0005732
ISO
PLAZA Integrative Orthologysno(s)RNA-containing ribonucleoprotein complex AT1G63780

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044281 U3 snoRNP protein/Ribosome production factor 1
IPR007109 Brix domain
Mapman id Description
17.1.3.2.1.1.2 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.MPP10 module.assembly factor (Imp4)