Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p17790 Brassica napus
Aa31LG1G12580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2437 Anthoceros agrestis
Actinidia03730 Actinidia chinensis
Actinidia20454 Actinidia chinensis
Ah.01g014360 Amaranthus hybridus
AL8G37190 Arabidopsis lyrata
Aqoxy1G01246 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.068WZH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BZC8YM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ETHX4E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VBZF8N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X2DMBM Arachis hypogaea
AT5G60600 Arabidopsis thaliana
ATR0115G030 Amborella trichopoda
ATR0561G078 Amborella trichopoda
Atru.BG.119.p Acer truncatum
Atru.chr3.3635 Acer truncatum
AUR62024990 Chenopodium quinoa
AUR62039630 Chenopodium quinoa
BcaB08g36355 Brassica carinata
BcaC04g19719 Brassica carinata
BolC9t58204H Brassica oleracea
BraA10t43856Z Brassica rapa
C09p53300 Brassica napus
C09p53310 Brassica napus
CAN.G631.24 Capsicum annuum
CAN.G970.17 Capsicum annuum
CANSAT54G2863 Cannabis sativa
CARHR274260 Cardamine hirsuta
Carub.0008s2128 Capsella rubella
Ca_01417_v3 Cicer arietinum L.
Ca_28980_v3 Cicer arietinum L.
CBR_g51121 Chara braunii
Cc00_g31230 Coffea canephora
Cc01_g11160 Coffea canephora
CDE02G3870 Ceratophyllum demersum
CDE08G0282 Ceratophyllum demersum
Ciclev10027881m.g Citrus clementina
CiPaw.13G112600 Carya illinoinensis
CiPaw.14G080300 Carya illinoinensis
ClCG03G002170 Citrullus lanatus
COL.COLO4_18338 Corchorus olitorius
COL.COLO4_18339 Corchorus olitorius
Cpa.g.sc216.13 Carica papaya
Cre12.g490350 Chlamydomonas reinhardtii
CsaV3_1G012820 Cucumis sativus L.
CSS0023657 Camellia sinensis var. sinensis
CSS0023686 Camellia sinensis var. sinensis
CSS0037274 Camellia sinensis var. sinensis
DCAR_006060 Daucus carota
DCAR_015537 Daucus carota
Dinv32749 Davidia involucrata
Duzib168G1617 Durio zibethinus
ECA238G4788 Erigeron canadensis
EL10Ac9g22507 Beta vulgaris
Eucgr.B02495 Eucalyptus grandis
FAN11G2723 Fragaria x ananassa
FAN16G0818 Fragaria x ananassa
FAN21G2260 Fragaria x ananassa
FAN25G3839 Fragaria x ananassa
FvH4_3g32460 Fragaria vesca
Glyma.12G173200 Glycine max
Glyma.13G326400 Glycine max
Gohir.A08G197500 Gossypium hirsutum
Gohir.D08G214700 Gossypium hirsutum
Gorai.004G228600 Gossypium raimondii
GSVIVG01025182001 Vitis vinifera
HanXRQChr02g0034121 Helianthus annuus
HanXRQChr03g0075841 Helianthus annuus
HanXRQChr07g0197541 Helianthus annuus
HanXRQChr12g0375701 Helianthus annuus
HanXRQChr13g0402271 Helianthus annuus
HanXRQChr14g0452871 Helianthus annuus
Haze_23837 Corylus avellana
Haze_23839 Corylus avellana
Hma1.2p1_0105F.1_g050690 Hydrangea macrophylla
Hma1.2p1_0391F.1_g142750 Hydrangea macrophylla
Hma1.2p1_1031F.1_g250040 Hydrangea macrophylla
Hma1.2p1_1031F.1_g250050 Hydrangea macrophylla
Hma1.2p1_1050F.1_g251950 Hydrangea macrophylla
HPP92_014714 Vanilla planifolia
Hund08138 Selenicereus undatus
Lalb_Chr03g0027311 Lupinus albus
Lalb_Chr14g0374701 Lupinus albus
Lalb_Chr24g0394611 Lupinus albus
Lj2C1029G11 Lonicera japonica
Lj2C1029T7 Lonicera japonica
Lj3g0003128 Lotus japonicus
Lsat_1_v5_gn_2_98360 Lactuca sativa
Manes.04G021700 Manihot esculenta
Manes.11G144700 Manihot esculenta
Mapoly0048s0084 Marchantia polymorpha
MBI07_g19314_MAGBIO Magnolia biondii
MBI12_g31227_MAGBIO Magnolia biondii
MBI12_g33358_MAGBIO Magnolia biondii
MCO10G060 Micromonas commoda
MD03G1117300 Malus domestica
MD11G1135000 Malus domestica
Medtr2g094160 Medicago truncatula
MELO3C005061.2 Cucumis melo
Migut.N02606 Erythranthe guttata
MSTRG.12319 Avicennia marina
MSTRG.17806 Avicennia marina
Nitab4.5_0000650g0220 Nicotiana tabacum
Nitab4.5_0006333g0040 Nicotiana tabacum
Nitab4.5_0011114g0030 Nicotiana tabacum
Nitab4.5_0012814g0010 Nicotiana tabacum
Nn2g10781 Nelumbo nucifera
Oeu002865.1 Olea europaea
Oeu059093.1 Olea europaea
Os02g0603800 Oryza sativa ssp. japonica
Peaxi162Scf00218g02111 Petunia axillaris
Peaxi162Scf00270g00819 Petunia axillaris
PGR102G1912 Punica granatum
PGSC0003DMG400008050 Solanum tuberosum
Phvul.005G135800 Phaseolus vulgaris
Potri.004G210400 Populus trichocarpa
Potri.009G013400 Populus trichocarpa
Pp3c19_16320 Physcomitrium patens
Pp3c21_19070 Physcomitrium patens
Pp3c22_14940 Physcomitrium patens
PRCOL_00002263 Prasinoderma coloniale
Prupe.6G101000 Prunus persica
Psat5g278240 Pisum sativum
PSO210G0023 Papaver somniferum
PSO339G0771 Papaver somniferum
PSO384G0735 Papaver somniferum
PSO832G0757 Papaver somniferum
QL01p022296 Quercus lobata
RcHm_v2.0_Chr5g0059471 Rosa chinensis
Rhsim01G0217200 Rhododendron simsii
Sabra04G0142000 Salix brachista
Sabra09G0008100 Salix brachista
SalBow3G4399 Salvia bowleyana
Sc06g0010150 Simmondsia chinensis
Sed0018088 Sechium edule
SEGI_29082 Sequoiadendron giganteum
SEGI_34190 Sequoiadendron giganteum
SEGI_37191 Sequoiadendron giganteum
SEGI_39119 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06316 Striga asiatica
SGA_v2.0_scaffold290G47319 Striga asiatica
SGA_v2.0_scaffold2G00894 Striga asiatica
SGA_v2.0_scaffold84G26546 Striga asiatica
SMO146G0141 Selaginella moellendorffii
Solyc11g069380.2 Solanum lycopersicum
Sopen11g028100 Solanum pennellii
Sp6g22170 Schrenkiella parvula
TAR381G0461 Trochodendron aralioides
TAR381G1634 Trochodendron aralioides
TAR633G1103 Trochodendron aralioides
TAR636G1311 Trochodendron aralioides
TAR636G1671 Trochodendron aralioides
TAR636G3405 Trochodendron aralioides
TAR636G3504 Trochodendron aralioides
THA.LOC104810855 Tarenaya hassleriana
Thecc.09G340000 Theobroma cacao
Thhalv10012774m.g Eutrema salsugineum
TPR.G11486 Trifolium pratense
TWI31G1183 Tripterygium wilfordii
TWI79G1123 Tripterygium wilfordii
unitig_27.g25060 Utricularia gibba
vmacro14439 Vaccinium macrocarpon
VMungo1080G1181 Vigna mungo
Zm00001eb246530 Zea mays

User provided reference genes

Program Settings