Gene: SGA_v2.0_scaffold84G26546
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold84G26546
- Transcript Identifier SGA_v2.0_scaffold84T26546
- Gene Type Coding gene
- Location scaffold84 : 1124274-1146965 : negative
Gene Family Information
- ID HOM05D004298
- #Genes/#Species 166/98
- Phylogenetic origin
- ID ORTHO05D006236
- #Genes/#Species 145/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016114 | IEA | InterPro | terpenoid biosynthetic process | |
| GO:0009617 | ISO | PLAZA Integrative Orthology | response to bacterium | AT5G60600 |
| GO:0019288 | ISO | PLAZA Integrative Orthology | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | AT5G60600 |
| GO:0009862 | ISO | PLAZA Integrative Orthology | systemic acquired resistance, salicylic acid mediated signaling pathway | AT5G60600 |
| GO:0008299 | ISO | PLAZA Homology (enrichment) | isoprenoid biosynthetic process | HOM05D004298 |
| GO:0044237 | ISO | PLAZA Homology (enrichment) | cellular metabolic process | HOM05D004298 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046429 | IEA | InterPro | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | |
| GO:0005506 | ISO | PLAZA Homology (enrichment) | iron ion binding | HOM05D004298 |
| GO:0051539 | ISO | PLAZA Integrative Orthology | 4 iron, 4 sulfur cluster binding | AT5G60600 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G60600 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G60600 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT5G60600 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004588 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type |
| Mapman id | Description |
|---|---|
| 9.1.2.7 | Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.4-hydroxy-3-methylbut-2-enyl diphosphate synthase |