Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p05780 Brassica napus
A06p30500 Brassica napus
A06p32110 Brassica napus
A08p30650 Brassica napus
A10p27950 Brassica napus
Aa31LG1G18000 Aethionema arabicum
Aa31LG3G17740 Aethionema arabicum
Aa31LG4G3130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2591 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3779 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1024 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1025 Anthoceros agrestis
Actinidia06578 Actinidia chinensis
Actinidia20030 Actinidia chinensis
AL1G38920 Arabidopsis lyrata
AL697U10010 Arabidopsis lyrata
AL6G19650 Arabidopsis lyrata
AL8G41110 Arabidopsis lyrata
Aqoxy6G00309 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.054DCV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GQS5IM Arachis hypogaea
AT5G09260 Arabidopsis thaliana
AT5G63880 Arabidopsis thaliana
ATR0706G129 Amborella trichopoda
Atru.chr4.994 Acer truncatum
AUR62012692 Chenopodium quinoa
AUR62021963 Chenopodium quinoa
BcaB02g09769 Brassica carinata
BcaB08g37222 Brassica carinata
BcaC01g02639 Brassica carinata
BcaNung04632 Brassica carinata
BcaNung04637 Brassica carinata
BolC3t18513H Brassica oleracea
BolC9t53867H Brassica oleracea
BolC9t59508H Brassica oleracea
BolC9t59565H Brassica oleracea
BraA06t25999Z Brassica rapa
BraA10t44845Z Brassica rapa
C03p62560 Brassica napus
C09p09560 Brassica napus
C09p67470 Brassica napus
C09p68060 Brassica napus
C09p68090 Brassica napus
C09p68120 Brassica napus
CAN.G566.38 Capsicum annuum
CAN.G607.7 Capsicum annuum
CANSAT80G1716 Cannabis sativa
CARHR204160 Cardamine hirsuta
CARHR204170 Cardamine hirsuta
CARHR277780 Cardamine hirsuta
Carub.0006s0781 Capsella rubella
Carub.0008s2465 Capsella rubella
Ca_16982_v3 Cicer arietinum L.
CBR_g70720 Chara braunii
Cc03_g16000 Coffea canephora
CDE02G0727 Ceratophyllum demersum
CDE08G1470 Ceratophyllum demersum
Cfa002202 Carpinus fangiana
Cfa023619 Carpinus fangiana
Cfa026504 Carpinus fangiana
Ciclev10002389m.g Citrus clementina
CiPaw.03G117900 Carya illinoinensis
CiPaw.04G079800 Carya illinoinensis
ClCG04G001580 Citrullus lanatus
Cpa.g.sc37.8 Carica papaya
Cre13.g589700 Chlamydomonas reinhardtii
CsaV3_4G030940 Cucumis sativus L.
CSS0033426 Camellia sinensis var. sinensis
DCAR_001476 Daucus carota
DCAR_020711 Daucus carota
Dinv12984 Davidia involucrata
Duzib187G0355 Durio zibethinus
Duzib264G0533 Durio zibethinus
ECA234G4310 Erigeron canadensis
EL10Ac8g20044 Beta vulgaris
Eucgr.H05139 Eucalyptus grandis
FAN03G0757 Fragaria x ananassa
FAN06G1556 Fragaria x ananassa
FAN07G1696 Fragaria x ananassa
FAN10G2762 Fragaria x ananassa
FAN12G0473 Fragaria x ananassa
FAN12G2135 Fragaria x ananassa
FAN22G0010 Fragaria x ananassa
FvH4_4g10490 Fragaria vesca
FvH4_7g03820 Fragaria vesca
Glyma.04G210200 Glycine max
Glyma.06G155800 Glycine max
Gohir.A05G382800 Gossypium hirsutum
Gohir.D04G032400 Gossypium hirsutum
Gorai.012G036800 Gossypium raimondii
GSVIVG01029745001 Vitis vinifera
HanXRQChr09g0241311 Helianthus annuus
Haze_25379 Corylus avellana
Haze_26675 Corylus avellana
HPP92_022156 Vanilla planifolia
Hund21406 Selenicereus undatus
Lalb_Chr08g0238191 Lupinus albus
Lalb_Chr11g0068611 Lupinus albus
Lj1g0004585 Lotus japonicus
Lj2A489T51 Lonicera japonica
Lj2g0007917 Lotus japonicus
Lj4g0011662 Lotus japonicus
Lsat_1_v5_gn_4_38601 Lactuca sativa
Manes.06G003800 Manihot esculenta
Mapoly0073s0065 Marchantia polymorpha
MBI04_g07580_MAGBIO Magnolia biondii
MBI04_g38139_MAGBIO Magnolia biondii
MBI18_g28836_MAGBIO Magnolia biondii
MCO14G274 Micromonas commoda
MD15G1135100 Malus domestica
Medtr3g096680 Medicago truncatula
MELO3C008970.2 Cucumis melo
Migut.G00927 Erythranthe guttata
MSTRG.22052 Avicennia marina
Nitab4.5_0000013g0100 Nicotiana tabacum
Nitab4.5_0000668g0170 Nicotiana tabacum
Nitab4.5_0008205g0020 Nicotiana tabacum
Nitab4.5_0009744g0020 Nicotiana tabacum
Nn5g28435 Nelumbo nucifera
Oeu022909.3 Olea europaea
Oeu050306.1 Olea europaea
Os02g0596500 Oryza sativa ssp. japonica
Peaxi162Scf00169g00092 Petunia axillaris
Peaxi162Scf01205g00036 Petunia axillaris
PGR102G2430 Punica granatum
Phvul.009G154500 Phaseolus vulgaris
Potri.005G067700 Populus trichocarpa
Potri.007G101500 Populus trichocarpa
Pp3c2_32100 Physcomitrium patens
PRCOL_00005830 Prasinoderma coloniale
Prupe.4G274300 Prunus persica
Psat5g059640 Pisum sativum
PSO170G3147 Papaver somniferum
PSO407G0164 Papaver somniferum
PSO675G1889 Papaver somniferum
QL10p041258 Quercus lobata
QL10p041526 Quercus lobata
RcHm_v2.0_Chr4g0406031 Rosa chinensis
Rhsim08G0027500 Rhododendron simsii
Sabra05G0055600 Salix brachista
Sabra07G0083700 Salix brachista
Sc03g0010160 Simmondsia chinensis
Sed0015518 Sechium edule
SGA_v2.0_scaffold12G06217 Striga asiatica
SMO232G0091 Selaginella moellendorffii
Solyc12g096650.2 Solanum lycopersicum
Sopen12g032480 Solanum pennellii
Sp2g26940 Schrenkiella parvula
Sp6g34050 Schrenkiella parvula
TAR376G0205 Trochodendron aralioides
TAR628G0040 Trochodendron aralioides
THA.LOC104818421 Tarenaya hassleriana
THA.LOC104819347 Tarenaya hassleriana
Thecc.01G137100 Theobroma cacao
Thhalv10004899m.g Eutrema salsugineum
Thhalv10014638m.g Eutrema salsugineum
TPR.G24222 Trifolium pratense
TPR.G33552 Trifolium pratense
TWI75G0304 Tripterygium wilfordii
TWI79G0936 Tripterygium wilfordii
unitig_736.g22477 Utricularia gibba
vmacro18460 Vaccinium macrocarpon
VMungo1309G0657 Vigna mungo
VMungo1309G3080 Vigna mungo
Zm00001eb183830 Zea mays
Zm00001eb246180 Zea mays

User provided reference genes

Program Settings