Gene: Potri.005G067700
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.005G067700
- Transcript Identifier Potri.005G067700.1
- Gene Type Coding gene
- Location Chr05 : 4390878-4393910 : negative
Gene Family Information
- ID HOM05D004285
- #Genes/#Species 166/93
- Phylogenetic origin
- ID ORTHO05D005176
- #Genes/#Species 163/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.005G067700.v4.1
- pacid 42802823
- synonym Pt-ATHDH.2
Descriptions
- Description K12195 - charged multivesicular body protein 6 (CHMP6, VPS20)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007034 | IEA | InterPro | vacuolar transport | |
| GO:0070676 | ISO | PLAZA Integrative Orthology | intralumenal vesicle formation | AT5G09260 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G63880 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005770 | ISO | PLAZA Integrative Orthology | late endosome | AT5G09260 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G09260 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G09260 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005024 | Snf7 family |
| Mapman id | Description |
|---|---|
| 22.4.1.3.1 | Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-III complex.component VPS20 |