Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p43760 Brassica napus
A09p47620 Brassica napus
Aa31sc35G50 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1414__1415 Anthoceros agrestis
Actinidia07299 Actinidia chinensis
Actinidia27696 Actinidia chinensis
Actinidia30163 Actinidia chinensis
Ah.11g049770 Amaranthus hybridus
AL5G35750 Arabidopsis lyrata
Aqoxy5G00225 Aquilegia oxysepala
Aqoxy5G00226 Aquilegia oxysepala
Aqoxy7G01887 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3W1S0R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KRWI3G Arachis hypogaea
AT3G54670 Arabidopsis thaliana
ATR0827G015 Amborella trichopoda
ATR0827G146 Amborella trichopoda
Atru.chr5.1694 Acer truncatum
AUR62011867 Chenopodium quinoa
AUR62024710 Chenopodium quinoa
BcaB01g01093 Brassica carinata
BcaC07g39797 Brassica carinata
BolC3t17695H Brassica oleracea
BolC4t25359H Brassica oleracea
BolC8t50593H Brassica oleracea
BraA03t13511Z Brassica rapa
BraA09t40218Z Brassica rapa
C03p53990 Brassica napus
C04p37830 Brassica napus
C04p37840 Brassica napus
C04p37850 Brassica napus
C08p29820 Brassica napus
CAN.G53.6 Capsicum annuum
CAN.G646.2 Capsicum annuum
CAN.G646.3 Capsicum annuum
CAN.G771.28 Capsicum annuum
CAN.G89.12 Capsicum annuum
CANSAT01G2283 Cannabis sativa
CARHR164590 Cardamine hirsuta
Carub.0005s2127 Capsella rubella
Ca_09679_v3 Cicer arietinum L.
CBR_g38546 Chara braunii
CBR_g38548 Chara braunii
Cc01_g18290 Coffea canephora
Cc01_g18300 Coffea canephora
CDE03G0492 Ceratophyllum demersum
Cfa002432 Carpinus fangiana
Cfa024809 Carpinus fangiana
Ciclev10024065m.g Citrus clementina
CiPaw.03G264900 Carya illinoinensis
ClCG09G008240 Citrullus lanatus
COL.COLO4_03878 Corchorus olitorius
COL.COLO4_04038 Corchorus olitorius
COL.COLO4_05888 Corchorus olitorius
COL.COLO4_26949 Corchorus olitorius
Cpa.g.c35556 Carica papaya
Cpa.g.sc50.12 Carica papaya
Cre15.g635800 Chlamydomonas reinhardtii
CsaV3_7G026800 Cucumis sativus L.
CSS0001085 Camellia sinensis var. sinensis
DCAR_005687 Daucus carota
DCAR_008598 Daucus carota
Dinv34632 Davidia involucrata
Duzib133G0778 Durio zibethinus
Duzib138G0514 Durio zibethinus
ECA236G1622 Erigeron canadensis
EL10Ac3g06497 Beta vulgaris
EL10Ac8g19733 Beta vulgaris
EL10Ac9g22372 Beta vulgaris
EL10As5g23471 Beta vulgaris
Eucgr.B01550 Eucalyptus grandis
FAN15G3235 Fragaria x ananassa
FAN20G2335 Fragaria x ananassa
FAN24G0573 Fragaria x ananassa
FAN27G0190 Fragaria x ananassa
FvH4_2g21371 Fragaria vesca
Glyma.10G037300 Glycine max
Glyma.13G123700 Glycine max
Gohir.A07G213150 Gossypium hirsutum
Gohir.A07G213200 Gossypium hirsutum
Gohir.D07G219350 Gossypium hirsutum
Gorai.001G253800 Gossypium raimondii
HanXRQChr02g0038071 Helianthus annuus
Haze_12574 Corylus avellana
Haze_24635 Corylus avellana
Haze_24638 Corylus avellana
Haze_26530 Corylus avellana
Hma1.2p1_0273F.1_g109650 Hydrangea macrophylla
HPP92_014764 Vanilla planifolia
HPP92_014765 Vanilla planifolia
HPP92_014766 Vanilla planifolia
HPP92_028092 Vanilla planifolia
HPP92_028093 Vanilla planifolia
HPP92_028094 Vanilla planifolia
Hund02916 Selenicereus undatus
Lalb_Chr06g0170461 Lupinus albus
Lalb_Chr06g0170471 Lupinus albus
Lj1A67T41 Lonicera japonica
Lj2g0002321 Lotus japonicus
Lj5g0004279 Lotus japonicus
Lsat_1_v5_gn_4_2320 Lactuca sativa
Lsat_1_v5_gn_8_92740 Lactuca sativa
Manes.09G011696 Manihot esculenta
Manes.12G032800 Manihot esculenta
Mapoly0107s0024 Marchantia polymorpha
MBI07_g16928_MAGBIO Magnolia biondii
MBI15_g43207_MAGBIO Magnolia biondii
MCO11G672 Micromonas commoda
MD05G1196500 Malus domestica
MD10G1183700 Malus domestica
Medtr0003s0460 Medicago truncatula
Medtr1g058610 Medicago truncatula
Medtr1g059520 Medicago truncatula
Medtr1g069910 Medicago truncatula
MELO3C012730.2 Cucumis melo
Migut.M01725 Erythranthe guttata
Migut.N02206 Erythranthe guttata
MSTRG.12532 Avicennia marina
Nitab4.5_0000470g0060 Nicotiana tabacum
Nitab4.5_0006457g0030 Nicotiana tabacum
Nn3g19665 Nelumbo nucifera
Oeu025851.5 Olea europaea
Os12g0641500 Oryza sativa ssp. japonica
Peaxi162Scf00013g01122 Petunia axillaris
Peaxi162Scf00123g01726 Petunia axillaris
Peaxi162Scf00855g00004 Petunia axillaris
PGR031G2496 Punica granatum
PGSC0003DMG400020146 Solanum tuberosum
Phvul.007G192600 Phaseolus vulgaris
Potri.005G224900 Populus trichocarpa
Pp3c12_10030 Physcomitrium patens
Pp3c14_7530 Physcomitrium patens
Pp3c14_8760 Physcomitrium patens
PRCOL_00005438 Prasinoderma coloniale
Prupe.8G222900 Prunus persica
Prupe.8G223100 Prunus persica
Psat6g041920 Pisum sativum
PSO210G1261 Papaver somniferum
PSO832G3143 Papaver somniferum
QL09p038899 Quercus lobata
QL09p038937 Quercus lobata
QL09p038954 Quercus lobata
QL09p039011 Quercus lobata
RcHm_v2.0_Chr6g0287971 Rosa chinensis
Rhsim13G0035400 Rhododendron simsii
Sabra02G0018500 Salix brachista
Sabra05G0173500 Salix brachista
Sabra05G0184700 Salix brachista
SalBow4G1077 Salvia bowleyana
Sc17g0000640 Simmondsia chinensis
Sed0028046 Sechium edule
SEGI_02214 Sequoiadendron giganteum
SGA_v2.0_scaffold2G00877 Striga asiatica
SHI09769 Sapria himalayana
SHI09770 Sapria himalayana
SMO357G0017 Selaginella moellendorffii
Solyc06g083870.3 Solanum lycopersicum
Sopen06g035270 Solanum pennellii
Sp5g07780 Schrenkiella parvula
TAR362G0337 Trochodendron aralioides
THA.LOC104798817 Tarenaya hassleriana
Thecc.01G257700 Theobroma cacao
Thhalv10010074m.g Eutrema salsugineum
TPR.G23973 Trifolium pratense
TPR.G24001 Trifolium pratense
TPR.G24931 Trifolium pratense
TPR.G24939 Trifolium pratense
TPR.G25133 Trifolium pratense
TWI18G1245 Tripterygium wilfordii
vmacro02666 Vaccinium macrocarpon
VMungo0720G2324 Vigna mungo
Zm00001eb038490 Zea mays

User provided reference genes

Program Settings