Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p60060 Brassica napus
Aa31LG1G11990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2887 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2510 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3419 Anthoceros agrestis
Actinidia23914 Actinidia chinensis
AL8G35510 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.3AM9HW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4J3X95 Arachis hypogaea
AT5G59180 Arabidopsis thaliana
ATR0697G111 Amborella trichopoda
Atru.chr13.1634 Acer truncatum
Atru.chr3.4016 Acer truncatum
AUR62020050 Chenopodium quinoa
AUR62028438 Chenopodium quinoa
BcaB01g04613 Brassica carinata
BcaB01g04614 Brassica carinata
BcaB05g22479 Brassica carinata
BcaB08g36284 Brassica carinata
BcaC03g14038 Brassica carinata
BcaC04g19817 Brassica carinata
BolC3t13845H Brassica oleracea
BolC9t57997H Brassica oleracea
BraA02t05814Z Brassica rapa
BraA03t10501Z Brassica rapa
BraA10t43718Z Brassica rapa
C02p12800 Brassica napus
C03p13980 Brassica napus
C09p51390 Brassica napus
CAN.G141.22 Capsicum annuum
CANSAT25G0006 Cannabis sativa
CANSAT25G0085 Cannabis sativa
CARHR285370 Cardamine hirsuta
Carub.0008s1977 Capsella rubella
Ca_04445_v3 Cicer arietinum L.
Ca_18265_v3 Cicer arietinum L.
Cc01_g13450 Coffea canephora
CDE02G2400 Ceratophyllum demersum
Cfa017837 Carpinus fangiana
Ciclev10029380m.g Citrus clementina
CiPaw.14G064200 Carya illinoinensis
ClCG01G008130 Citrullus lanatus
COL.COLO4_18592 Corchorus olitorius
COL.COLO4_35818 Corchorus olitorius
Cpa.g.sc81.63 Carica papaya
Cre16.g667750 Chlamydomonas reinhardtii
CsaV3_5G020160 Cucumis sativus L.
CSS0028029 Camellia sinensis var. sinensis
CSS0043288 Camellia sinensis var. sinensis
DCAR_007422 Daucus carota
Dinv17058 Davidia involucrata
Dinv43002 Davidia involucrata
Dinv43095 Davidia involucrata
Duzib147G0502 Durio zibethinus
Duzib150G0800 Durio zibethinus
ECA247G2777 Erigeron canadensis
ECA248G0832 Erigeron canadensis
EL10Ac7g16082 Beta vulgaris
Eucgr.J01999 Eucalyptus grandis
FAN02G2699 Fragaria x ananassa
FAN05G0006 Fragaria x ananassa
FAN09G1115 Fragaria x ananassa
FAN09G4540 Fragaria x ananassa
FAN14G5530 Fragaria x ananassa
FAN15G0434 Fragaria x ananassa
FAN24G0219 Fragaria x ananassa
FAN27G1470 Fragaria x ananassa
FvH4_2g24550 Fragaria vesca
FvH4_6g26920 Fragaria vesca
Glyma.05G130300 Glycine max
Glyma.08G085100 Glycine max
Glyma.14G007900 Glycine max
Gohir.A05G092600 Gossypium hirsutum
Gohir.A08G001500 Gossypium hirsutum
Gohir.D05G093400 Gossypium hirsutum
Gohir.D08G012200 Gossypium hirsutum
Gorai.004G006200 Gossypium raimondii
Gorai.009G096000 Gossypium raimondii
GSVIVG01024869001 Vitis vinifera
HanXRQChr09g0248471 Helianthus annuus
HanXRQChr09g0256561 Helianthus annuus
Haze_00336 Corylus avellana
Haze_27325 Corylus avellana
Hma1.2p1_0274F.1_g110460 Hydrangea macrophylla
Hund04913 Selenicereus undatus
Hund18882 Selenicereus undatus
Lalb_Chr03g0035651 Lupinus albus
Lalb_Chr19g0130021 Lupinus albus
Lj1A145T59 Lonicera japonica
Lj2g0015661 Lotus japonicus
Lj2g0017435 Lotus japonicus
Lj6g0006771 Lotus japonicus
Lsat_1_v5_gn_5_161301 Lactuca sativa
Manes.02G127300 Manihot esculenta
Mapoly0121s0023 Marchantia polymorpha
MBI05_g02651_MAGBIO Magnolia biondii
MCO11G406 Micromonas commoda
MD06G1239600 Malus domestica
MD14G1245600 Malus domestica
Medtr4g096810 Medicago truncatula
MELO3C027194.2 Cucumis melo
Migut.K00396 Erythranthe guttata
Migut.K00397 Erythranthe guttata
MSTRG.16970 Avicennia marina
MSTRG.20492 Avicennia marina
Nitab4.5_0000102g0420 Nicotiana tabacum
Nitab4.5_0000839g0100 Nicotiana tabacum
Nitab4.5_0002649g0030 Nicotiana tabacum
Nitab4.5_0005607g0010 Nicotiana tabacum
Nitab4.5_0009356g0020 Nicotiana tabacum
Nn1g09527 Nelumbo nucifera
Nn5g28581 Nelumbo nucifera
Oeu004186.1 Olea europaea
Oeu007669.1 Olea europaea
Oeu017406.1 Olea europaea
Os05g0400700 Oryza sativa ssp. japonica
Peaxi162Scf00481g00055 Petunia axillaris
PGR102G0470 Punica granatum
PGSC0003DMG400020826 Solanum tuberosum
Phvul.002G193600 Phaseolus vulgaris
Potri.001G377200 Populus trichocarpa
Pp3c19_12780 Physcomitrium patens
Pp3c19_12781 Physcomitrium patens
Pp3c6_9100 Physcomitrium patens
PRCOL_00005897 Prasinoderma coloniale
Prupe.4G244700 Prunus persica
Prupe.5G243500 Prunus persica
Psat7g090040 Pisum sativum
PSO541G5855 Papaver somniferum
PSO675G0394 Papaver somniferum
PSO675G2284 Papaver somniferum
PSO675G7761 Papaver somniferum
QL12p009539 Quercus lobata
RcHm_v2.0_Chr2g0128671 Rosa chinensis
RcHm_v2.0_Chr6g0292371 Rosa chinensis
Rhsim01G0232900 Rhododendron simsii
Rhsim10G0155000 Rhododendron simsii
Rhsim10G0155100 Rhododendron simsii
Sabra16G0248500 Salix brachista
Sc12g0001200 Simmondsia chinensis
Sed0005531 Sechium edule
Sed0006109 Sechium edule
SEGI_08143 Sequoiadendron giganteum
SEGI_11642 Sequoiadendron giganteum
SEGI_41420 Sequoiadendron giganteum
SGA_v2.0_scaffold183G39883 Striga asiatica
SGA_v2.0_scaffold45G17132 Striga asiatica
SHI32325 Sapria himalayana
SHI49599 Sapria himalayana
SHI51478 Sapria himalayana
SHI51733 Sapria himalayana
SHI52156 Sapria himalayana
SHI53421 Sapria himalayana
SHI53714 Sapria himalayana
SMO146G0181 Selaginella moellendorffii
SMO367G0145 Selaginella moellendorffii
Solyc06g005790.3 Solanum lycopersicum
Sopen06g001770 Solanum pennellii
Sp6g20810 Schrenkiella parvula
TAR369G0144 Trochodendron aralioides
TAR623G0707 Trochodendron aralioides
THA.LOC104799424 Tarenaya hassleriana
THA.LOC104810752 Tarenaya hassleriana
Thecc.09G313400 Theobroma cacao
Thhalv10014822m.g Eutrema salsugineum
TPR.G4935 Trifolium pratense
TWI31G1060 Tripterygium wilfordii
TWI75G1574 Tripterygium wilfordii
unitig_0.g646 Utricularia gibba
vmacro14563 Vaccinium macrocarpon
VMungo0251G1187 Vigna mungo
VMungo0647G0323 Vigna mungo
Zm00001eb287570 Zea mays

User provided reference genes

Program Settings