Gene: Zm00001eb287570

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb287570
  • Transcript Identifier Zm00001eb287570_T002
  • Gene Type Coding gene
  • Location 6 : 156255156-156257261 : negative

Gene Family Information

  • ID HOM05D004044
  • #Genes/#Species 173/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb287570_T002
  • pid Zm00001eb287570_P002
  • uniprot B4G147
  • uniprot A0A3L6E5B8
  • entrez 100283223
  • refseq NM_001156125.1
  • refseq NP_001149597.1
  • V4_identifier Zm00001d038139

Descriptions

  • Description Zm00001e031622
  • Description DNA-directed RNA polymerase II 19 kDa polypeptide
  • Description DNA-directed RNA polymerase II subunit 7
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IEA
GOA DatabaseDNA-templated transcription, initiation
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0000291
IBA
GOA Databasenuclear-transcribed mRNA catabolic process, exonucleolytic
GO:0006367
IBA
GOA Databasetranscription initiation from RNA polymerase II promoter
GO:0060213
IBA
GOA Databasepositive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0045948
IBA
GOA Databasepositive regulation of translational initiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003899
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0031369
IBA
GOA Databasetranslation initiation factor binding
GO:0003697
IBA
GOA Databasesingle-stranded DNA binding
GO:0003727
IBA
GOA Databasesingle-stranded RNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000932
IBA
GOA DatabaseP-body
GO:0005665
IBA
IEA
GOA DatabaseRNA polymerase II, core complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036898 RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR005576 RNA polymerase Rpb7-like , N-terminal
IPR003029 S1 domain
IPR012340 Nucleic acid-binding, OB-fold
IPR045113 RNA polymerase Rpb7-like
Mapman id Description
15.1.6.5 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 7