Gene: Os05g0400700

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os05g0400700
  • Transcript Identifier Os05t0400700-01
  • Gene Type Coding gene
  • Location chr05 : 19488663-19490508 : negative

Gene Family Information

  • ID HOM05D004044
  • #Genes/#Species 173/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os05t0400700-01
  • MSU-ID LOC_Os05g33240.1
  • uniprot Q0DIC6

Descriptions

  • Description Similar to DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006352
IEA
GOA DatabaseDNA-templated transcription, initiation
GO:0006352
IEA
InterProDNA-templated transcription, initiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003899
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005665
ISO
PLAZA Integrative OrthologyRNA polymerase II, core complex AT5G59180

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036898 RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR012340 Nucleic acid-binding, OB-fold
IPR005576 RNA polymerase Rpb7-like , N-terminal
IPR003029 S1 domain
IPR045113 RNA polymerase Rpb7-like
Mapman id Description
15.1.6.5 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 7