Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p48670 Brassica napus
A04p07280 Brassica napus
A09p45160 Brassica napus
Aa31LG10G7160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1572 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1582 Anthoceros agrestis
Actinidia19401 Actinidia chinensis
AL5G32640 Arabidopsis lyrata
Aqoxy3G00363 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8R0KJ7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KPCT5J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U5V8MN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YBFT0T Arachis hypogaea
AT3G52090 Arabidopsis thaliana
ATR0751G171 Amborella trichopoda
Atru.chr11.2605 Acer truncatum
AUR62018571 Chenopodium quinoa
AUR62020845 Chenopodium quinoa
AUR62028413 Chenopodium quinoa
AUR62029883 Chenopodium quinoa
AUR62043813 Chenopodium quinoa
BcaB01g00447 Brassica carinata
BcaB02g08590 Brassica carinata
BcaC02g09283 Brassica carinata
BcaNung06090 Brassica carinata
BolC4t25674H Brassica oleracea
BolC8t50352H Brassica oleracea
BraA03t13970Z Brassica rapa
BraA04t16424Z Brassica rapa
BraA09t39977Z Brassica rapa
C04p40890 Brassica napus
C07p46780 Brassica napus
C08p27350 Brassica napus
CAN.G631.46 Capsicum annuum
CANSAT35G0488 Cannabis sativa
CARHR161800 Cardamine hirsuta
Carub.0005s1841 Capsella rubella
Ca_04149_v3 Cicer arietinum L.
Ca_22196_v3 Cicer arietinum L.
Cc03_g12460 Coffea canephora
CDE10G0872 Ceratophyllum demersum
CDE10G1144 Ceratophyllum demersum
CDE10G1147 Ceratophyllum demersum
Cfa010792 Carpinus fangiana
Cfa026890 Carpinus fangiana
Ciclev10033103m.g Citrus clementina
CiPaw.03G260400 Carya illinoinensis
CiPaw.07G027500 Carya illinoinensis
CiPaw.13G006500 Carya illinoinensis
CiPaw.14G001100 Carya illinoinensis
CiPaw.15G004900 Carya illinoinensis
ClCG09G004040 Citrullus lanatus
ClCG10G012300 Citrullus lanatus
COL.COLO4_04866 Corchorus olitorius
COL.COLO4_11374 Corchorus olitorius
Cpa.g.sc125.23 Carica papaya
Cre13.g565550 Chlamydomonas reinhardtii
CsaV3_3G032080 Cucumis sativus L.
CsaV3_7G030940 Cucumis sativus L.
CSS0038705 Camellia sinensis var. sinensis
DCAR_003218 Daucus carota
DCAR_022384 Daucus carota
Dinv09344 Davidia involucrata
Dinv43429 Davidia involucrata
Duzib133G0053 Durio zibethinus
Duzib138G1764 Durio zibethinus
ECA234G4622 Erigeron canadensis
ECA248G0794 Erigeron canadensis
EL10Ac3g07468 Beta vulgaris
Eucgr.G03369 Eucalyptus grandis
FAN15G2464 Fragaria x ananassa
FAN20G2116 Fragaria x ananassa
FAN24G3392 Fragaria x ananassa
FAN27G3016 Fragaria x ananassa
FvH4_2g07830 Fragaria vesca
Glyma.06G198550 Glycine max
Glyma.09G228500 Glycine max
Glyma.12G008000 Glycine max
Gohir.A05G320501 Gossypium hirsutum
Gohir.A08G054500 Gossypium hirsutum
Gohir.D05G317100 Gossypium hirsutum
Gohir.D08G064200 Gossypium hirsutum
Gorai.004G066500 Gossypium raimondii
Gorai.009G339400 Gossypium raimondii
GSVIVG01036004001 Vitis vinifera
HanXRQChr01g0016491 Helianthus annuus
Haze_03179 Corylus avellana
Haze_25581 Corylus avellana
Haze_26797 Corylus avellana
Haze_27709 Corylus avellana
Hma1.2p1_0184F.1_g081310 Hydrangea macrophylla
Hma1.2p1_0495F.1_g165640 Hydrangea macrophylla
HPP92_009912 Vanilla planifolia
Hund20252 Selenicereus undatus
Hund27923 Selenicereus undatus
Lalb_Chr03g0040011 Lupinus albus
Lj3g0019679 Lotus japonicus
Lsat_1_v5_gn_1_106300 Lactuca sativa
Manes.07G007100 Manihot esculenta
Manes.10G140600 Manihot esculenta
Mapoly0064s0055 Marchantia polymorpha
MBI04_g41600_MAGBIO Magnolia biondii
MBI04_g44437_MAGBIO Magnolia biondii
MBI06_g01064_MAGBIO Magnolia biondii
MCO15G160 Micromonas commoda
MD05G1071600 Malus domestica
MD10G1083600 Malus domestica
Medtr4g037750 Medicago truncatula
Medtr6g004540 Medicago truncatula
MELO3C023562.2 Cucumis melo
MELO3C023983.2 Cucumis melo
Migut.D01881 Erythranthe guttata
Migut.E00937 Erythranthe guttata
Migut.O00412 Erythranthe guttata
MSTRG.9650 Avicennia marina
Nitab4.5_0000130g0090 Nicotiana tabacum
Nitab4.5_0002959g0030 Nicotiana tabacum
Nitab4.5_0005283g0050 Nicotiana tabacum
Nitab4.5_0010117g0010 Nicotiana tabacum
Nn7g36243 Nelumbo nucifera
Oeu048996.1 Olea europaea
Oeu061209.2 Olea europaea
Os07g0172500 Oryza sativa ssp. japonica
Peaxi162Scf00619g00024 Petunia axillaris
Peaxi162Scf00948g00222 Petunia axillaris
PGR031G2324 Punica granatum
PGSC0003DMG400008095 Solanum tuberosum
Phvul.011G010100 Phaseolus vulgaris
Potri.009G070900 Populus trichocarpa
Pp3c14_14340 Physcomitrium patens
Pp3c2_2740 Physcomitrium patens
PRCOL_00004893 Prasinoderma coloniale
Prupe.8G106600 Prunus persica
Psat0s2770g0080 Pisum sativum
PSO063G3578 Papaver somniferum
PSO591G0016 Papaver somniferum
PSO782G0643 Papaver somniferum
PSO832G0252 Papaver somniferum
QL04p008135 Quercus lobata
QL04p008511 Quercus lobata
RcHm_v2.0_Chr6g0262241 Rosa chinensis
Rhsim07G0056500 Rhododendron simsii
Sabra09G0053700 Salix brachista
SalBow8G4163 Salvia bowleyana
Sc10g0000140 Simmondsia chinensis
Sc11g0009080 Simmondsia chinensis
Sc23g0005950 Simmondsia chinensis
Sed0017618 Sechium edule
Sed0020332 Sechium edule
SEGI_19516 Sequoiadendron giganteum
SEGI_28477 Sequoiadendron giganteum
SEGI_39087 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31877 Striga asiatica
SGA_v2.0_scaffold7G04094 Striga asiatica
SMO145G0130 Selaginella moellendorffii
Solyc11g069910.2 Solanum lycopersicum
Sopen11g028370 Solanum pennellii
Sp5g10210 Schrenkiella parvula
TAR375G0219 Trochodendron aralioides
TAR633G2550 Trochodendron aralioides
TAR636G0073 Trochodendron aralioides
THA.LOC104801974 Tarenaya hassleriana
Thecc.01G409200 Theobroma cacao
Thhalv10010833m.g Eutrema salsugineum
TPR.G3662 Trifolium pratense
TWI09G0558 Tripterygium wilfordii
unitig_0.g2398 Utricularia gibba
vmacro13676 Vaccinium macrocarpon
VMungo1127G0323 Vigna mungo
Zm00001eb214480 Zea mays
Zm00001eb247210 Zea mays
Zm00001eb247220 Zea mays
Zm00001eb247230 Zea mays
Zm00001eb247250 Zea mays
Zm00001eb247270 Zea mays
Zm00001eb247280 Zea mays
Zm00001eb247290 Zea mays
Zm00001eb247300 Zea mays

User provided reference genes

Program Settings