Gene: CiPaw.03G260400

General Information

Structural Information

  • Species Carya illinoinensis
  • Gene Identifier CiPaw.03G260400
  • Transcript Identifier CiPaw.03G260400.1
  • Gene Type Coding gene
  • Location Chr03 : 53231879-53233254 : negative

Gene Family Information

  • ID HOM05D003916
  • #Genes/#Species 178/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id CiPaw.03G260400.v1.1
  • pacid 45818944

Descriptions

  • Description PF00076//PF13656 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L_2)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006366
ISO
PLAZA Homology (enrichment)transcription by RNA polymerase II HOM05D003916

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0001055
ISO
PLAZA Homology (enrichment)RNA polymerase II activity HOM05D003916

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000419
ISO
PLAZA Integrative OrthologyRNA polymerase V complex AT3G52090
GO:0000418
ISO
PLAZA Integrative OrthologyRNA polymerase IV complex AT3G52090
GO:0005665
ISO
PLAZA Integrative OrthologyRNA polymerase II, core complex AT3G52090

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036603 RNA polymerase, RBP11-like subunit
IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
Mapman id Description
35.1 not assigned.annotated