Gene: Sopen11g028370

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g028370
  • Transcript Identifier Sopen11g028370.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 64122897-64125802 : negative

Gene Family Information

  • ID HOM05D003916
  • #Genes/#Species 178/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g028370.1

Descriptions

  • Description Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V | homologous to budding yeast RPB11 and the E. oli RNA polymerase alpha subunit. | NRPB11 | FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding | INVOLVED IN: transcription | LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, holoenzyme, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site , DNA-directed RNA polymerase, dimerisation , DNA-directed RNA polymerase, RBP11-like .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006366
IEA
InterProtranscription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
InterProprotein dimerization activity
GO:0001055
IEA
InterProRNA polymerase II activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005665
IEA
InterProRNA polymerase II, core complex
GO:0000419
ISO
PLAZA Integrative OrthologyRNA polymerase V complex AT3G52090
GO:0000418
ISO
PLAZA Integrative OrthologyRNA polymerase IV complex AT3G52090

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036603 RNA polymerase, RBP11-like subunit
IPR037685 RNA polymerase RBP11
IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain
Mapman id Description
15.1.6.9 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 11