Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p01120 Brassica napus
Aa31LG5G1280 Aethionema arabicum
Actinidia28870 Actinidia chinensis
Ah.05g178790 Amaranthus hybridus
AL1G36740 Arabidopsis lyrata
AL4G22940 Arabidopsis lyrata
AL6G51780 Arabidopsis lyrata
Aqoxy2G01409 Aquilegia oxysepala
Aqoxy2G04194 Aquilegia oxysepala
Aqoxy4G02970 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EQY875 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GE61F7 Arachis hypogaea
AT4G01560 Arabidopsis thaliana
ATR0315G125 Amborella trichopoda
Atru.chr5.804 Acer truncatum
AUR62004576 Chenopodium quinoa
AUR62023522 Chenopodium quinoa
BcaB01g02136 Brassica carinata
BcaB01g02370 Brassica carinata
BcaB03g16536 Brassica carinata
BcaB04g19572 Brassica carinata
BcaB07g29875 Brassica carinata
BcaC01g06811 Brassica carinata
BcaC04g21274 Brassica carinata
BcaC04g24086 Brassica carinata
BcaC05g27916 Brassica carinata
BolC1t05365H Brassica oleracea
BolC1t05684H Brassica oleracea
BolC3t16823H Brassica oleracea
BolC3t16824H Brassica oleracea
BolC5t32656H Brassica oleracea
BolC9t53054H Brassica oleracea
BraA01t04482Z Brassica rapa
BraA09t35783Z Brassica rapa
C05p27100 Brassica napus
C05p27110 Brassica napus
C05p39230 Brassica napus
C09p01200 Brassica napus
CAN.G546.26 Capsicum annuum
CANSAT80G0986 Cannabis sativa
CARHR250110 Cardamine hirsuta
Carub.0002s2441 Capsella rubella
Carub.0004s0916 Capsella rubella
Carub.0006s3416 Capsella rubella
Carub.0006s3564 Capsella rubella
Ca_23480_v3 Cicer arietinum L.
CBR_g19066 Chara braunii
Cc00_g05410 Coffea canephora
Cc01_g05930 Coffea canephora
Cc01_g05940 Coffea canephora
Cc01_g05950 Coffea canephora
Cc09_g09110 Coffea canephora
CDE04G0523 Ceratophyllum demersum
Cfa003716 Carpinus fangiana
Cfa024576 Carpinus fangiana
Ciclev10020807m.g Citrus clementina
CiPaw.02G046000 Carya illinoinensis
ClCG10G008700 Citrullus lanatus
ClCG10G016910 Citrullus lanatus
COL.COLO4_23075 Corchorus olitorius
Cpa.g.c32082 Carica papaya
Cre04.g218850 Chlamydomonas reinhardtii
CsaV3_3G039450 Cucumis sativus L.
CSS0017733 Camellia sinensis var. sinensis
DCAR_024001 Daucus carota
Dinv32654 Davidia involucrata
Dinv40719 Davidia involucrata
Duzib133G1020 Durio zibethinus
Duzib138G1363 Durio zibethinus
ECA236G3056 Erigeron canadensis
EL10Ac1g00160 Beta vulgaris
Eucgr.A02139 Eucalyptus grandis
FAN01G1310 Fragaria x ananassa
FAN03G0853 Fragaria x ananassa
FAN03G2357 Fragaria x ananassa
FAN06G2806 Fragaria x ananassa
FAN06G3546 Fragaria x ananassa
FAN10G0112 Fragaria x ananassa
FAN10G1292 Fragaria x ananassa
FvH4_7g18100 Fragaria vesca
FvH4_7g18130 Fragaria vesca
Glyma.07G047700 Glycine max
Glyma.16G016200 Glycine max
Gohir.A07G133200 Gossypium hirsutum
Gohir.D07G137700 Gossypium hirsutum
Gorai.001G149800 Gossypium raimondii
GSVIVG01022422001 Vitis vinifera
GSVIVG01023391001 Vitis vinifera
HanXRQChr07g0187351 Helianthus annuus
Haze_15766 Corylus avellana
HPP92_016601 Vanilla planifolia
Lalb_Chr04g0254031 Lupinus albus
Lalb_Chr04g0254041 Lupinus albus
Lalb_Chr04g0254071 Lupinus albus
Lalb_Chr10g0100971 Lupinus albus
Lj3g0025959 Lotus japonicus
Lj9A609G66 Lonicera japonica
Lj9A609T73 Lonicera japonica
Lsat_1_v5_gn_7_76501 Lactuca sativa
Manes.07G093900 Manihot esculenta
Mapoly0132s0039 Marchantia polymorpha
MBI12_g05893_MAGBIO Magnolia biondii
MCO01G200 Micromonas commoda
MD01G1095300 Malus domestica
MD01G1097300 Malus domestica
MD07G1164400 Malus domestica
Medtr1g054855 Medicago truncatula
Medtr1g087510 Medicago truncatula
Medtr8g023820 Medicago truncatula
Medtr8g066245 Medicago truncatula
MELO3C009689.2 Cucumis melo
Migut.C00356 Erythranthe guttata
MSTRG.9234 Avicennia marina
Nitab4.5_0000329g0230 Nicotiana tabacum
Nitab4.5_0001819g0080 Nicotiana tabacum
Nn068s42296 Nelumbo nucifera
Nn1g08916 Nelumbo nucifera
Nn5g28264 Nelumbo nucifera
Oeu014509.1 Olea europaea
Os06g0137500 Oryza sativa ssp. japonica
Peaxi162Scf00004g04012 Petunia axillaris
Peaxi162Scf00004g04214 Petunia axillaris
Peaxi162Scf00004g04219 Petunia axillaris
Peaxi162Scf00086g01414 Petunia axillaris
PGR042G3296 Punica granatum
PGSC0003DMG400000409 Solanum tuberosum
Phvul.003G017600 Phaseolus vulgaris
Phvul.010G121301 Phaseolus vulgaris
Potri.002G182600 Populus trichocarpa
Potri.014G108400 Populus trichocarpa
Pp3c1_10040 Physcomitrium patens
PRCOL_00005239 Prasinoderma coloniale
Prupe.2G203400 Prunus persica
Psat4g164400 Pisum sativum
PSO339G4022 Papaver somniferum
PSO384G4956 Papaver somniferum
QL02p054986 Quercus lobata
RcHm_v2.0_Chr1g0321231 Rosa chinensis
RcHm_v2.0_Chr1g0346391 Rosa chinensis
RcHm_v2.0_Chr1g0361751 Rosa chinensis
RcHm_v2.0_Chr2g0110161 Rosa chinensis
RcHm_v2.0_Chr3g0479951 Rosa chinensis
RcHm_v2.0_Chr3g0493911 Rosa chinensis
RcHm_v2.0_Chr4g0406331 Rosa chinensis
RcHm_v2.0_Chr5g0043791 Rosa chinensis
RcHm_v2.0_Chr5g0052991 Rosa chinensis
RcHm_v2.0_Chr5g0055421 Rosa chinensis
RcHm_v2.0_Chr6g0259761 Rosa chinensis
RcHm_v2.0_Chr7g0204491 Rosa chinensis
RcHm_v2.0_Chr7g0219071 Rosa chinensis
RcHm_v2.0_Chr7g0228521 Rosa chinensis
Rhsim01G0181600 Rhododendron simsii
Sabra02G0132600 Salix brachista
Sabra14G0079900 Salix brachista
SalBow1G7347 Salvia bowleyana
SalBow1G8176 Salvia bowleyana
Sc01g0002090 Simmondsia chinensis
Sed0016671 Sechium edule
SEGI_13893 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07544 Striga asiatica
SGA_v2.0_scaffold82G26257 Striga asiatica
SMO244G0063 Selaginella moellendorffii
Solyc11g066280.3 Solanum lycopersicum
Sopen11g026020 Solanum pennellii
Sp6g01470 Schrenkiella parvula
TAR374G1339 Trochodendron aralioides
TAR375G0943 Trochodendron aralioides
TAR376G0628 Trochodendron aralioides
THA.LOC104825915 Tarenaya hassleriana
Thecc.01G330300 Theobroma cacao
Thhalv10014264m.g Eutrema salsugineum
Thhalv10028775m.g Eutrema salsugineum
TPR.G32793 Trifolium pratense
TWI09G0903 Tripterygium wilfordii
unitig_747.g21998 Utricularia gibba
vmacro11191 Vaccinium macrocarpon
VMungo0331G0507 Vigna mungo
Zm00001eb356330 Zea mays

User provided reference genes

Program Settings