Gene: PGSC0003DMG400000409

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG400000409
Transcript Identifier PGSC0003DMT400001077
Gene Type Coding gene
Location ST4.03ch11 : 39031314-39036744 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D003902
#Genes/#Species 178/96
Phylogenetic origin

ID ORTHO05D005866
#Genes/#Species 151/96
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

pacid 37464458
id PGSC0003DMG400000409.v4.03
uniprot M0ZHV3

Descriptions

Short descriptions
Ortholog descriptions

Description RNA processing factor 1

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006364	IBA IEA	GOA Database	rRNA processing
GO:0006364	IEA	InterPro	rRNA processing
GO:0000460	IBA	GOA Database	maturation of 5.8S rRNA
GO:0000470	IBA	GOA Database	maturation of LSU-rRNA
GO:0009793	ISO	PLAZA Integrative Orthology	embryo development ending in seed dormancy	AT4G01560

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0042134	IEA	GOA Database	rRNA primary transcript binding
GO:0042134	IEA	InterPro	rRNA primary transcript binding
GO:0019843	IEA	GOA Database	rRNA binding
GO:0019843	IEA	InterPro	rRNA binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0030687	IBA	GOA Database	preribosome, large subunit precursor
GO:0005730	IBA	GOA Database	nucleolus
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT4G01560

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR044281	U3 snoRNP protein/Ribosome production factor 1
IPR007109	Brix domain

Mapman id	Description
17.1.2.2.1.4	Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.assembly factor (RPF1)