Gene: Pp3c1_10040

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c1_10040
  • Transcript Identifier Pp3c1_10040V3.1
  • Gene Type Coding gene
  • Location Chr01 : 7264500-7265555 : negative

Gene Family Information

  • ID HOM05D003902
  • #Genes/#Species 178/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c1_10040V3.1
  • pacid 32971449
  • alias Phypa_137685
  • alias Phpat.001G040900
  • alias Pp1s139_5V6
  • uniprot A0A2K1L7M1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IBA
IEA
GOA DatabaserRNA processing
GO:0006364
IEA
InterProrRNA processing
GO:0000460
IBA
GOA Databasematuration of 5.8S rRNA
GO:0000470
IBA
GOA Databasematuration of LSU-rRNA
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G01560

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019843
IEA
GOA DatabaserRNA binding
GO:0019843
IEA
InterProrRNA binding
GO:0042134
IEA
GOA DatabaserRNA primary transcript binding
GO:0042134
IEA
InterProrRNA primary transcript binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030687
IBA
GOA Databasepreribosome, large subunit precursor
GO:0005730
IBA
GOA Databasenucleolus
GO:0005829
IEA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007109 Brix domain
IPR044281 U3 snoRNP protein/Ribosome production factor 1
Mapman id Description
17.1.2.2.1.4 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.assembly factor (RPF1)