Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p21860 Brassica napus
Aa31LG4G13900 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5081 Anthoceros agrestis
Actinidia07234 Actinidia chinensis
Actinidia24200 Actinidia chinensis
Actinidia24201 Actinidia chinensis
Actinidia24202 Actinidia chinensis
Actinidia35457 Actinidia chinensis
Actinidia37087 Actinidia chinensis
Actinidia37088 Actinidia chinensis
Actinidia37329 Actinidia chinensis
Actinidia37330 Actinidia chinensis
Actinidia37331 Actinidia chinensis
Actinidia37332 Actinidia chinensis
Ah.08g215860 Amaranthus hybridus
Ah.15g095680 Amaranthus hybridus
AL5G22600 Arabidopsis lyrata
Aqoxy2G01263 Aquilegia oxysepala
Aqoxy2G01563 Aquilegia oxysepala
Aqoxy4G02822 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3X8FVR Arachis hypogaea
AT3G44530 Arabidopsis thaliana
ATR0820G249 Amborella trichopoda
Atru.chr3.3302 Acer truncatum
AUR62009782 Chenopodium quinoa
AUR62039227 Chenopodium quinoa
AUR62044072 Chenopodium quinoa
BcaB01g01161 Brassica carinata
BcaB02g10752 Brassica carinata
BcaC01g02054 Brassica carinata
BolC3t19166H Brassica oleracea
BraA06t25277Z Brassica rapa
C03p69110 Brassica napus
CAN.G942.7 Capsicum annuum
CANSAT54G2221 Cannabis sativa
CARHR104350 Cardamine hirsuta
Carub.0005s1017 Capsella rubella
Ca_19387_v3 Cicer arietinum L.
Ca_19390_v3 Cicer arietinum L.
Ca_19879_v3 Cicer arietinum L.
CBR_g60059 Chara braunii
Cc01_g09440 Coffea canephora
Cc03_g06690 Coffea canephora
CDE06G1438 Ceratophyllum demersum
CDE06G1793 Ceratophyllum demersum
CDE08G0670 Ceratophyllum demersum
Cfa010046 Carpinus fangiana
Cfa026613 Carpinus fangiana
Ciclev10027719m.g Citrus clementina
CiPaw.14G101900 Carya illinoinensis
ClCG02G022110 Citrullus lanatus
COL.COLO4_19917 Corchorus olitorius
Cpa.g.c36505.3 Carica papaya
Cpa.g.c45307 Carica papaya
Cpa.g.sc1624.1 Carica papaya
Cre13.g575950 Chlamydomonas reinhardtii
CsaV3_6G014950 Cucumis sativus L.
CSS0003254 Camellia sinensis var. sinensis
CSS0013179 Camellia sinensis var. sinensis
CSS0026986 Camellia sinensis var. sinensis
DCAR_012182 Daucus carota
Dinv29460 Davidia involucrata
Dinv29461 Davidia involucrata
Dinv42569 Davidia involucrata
Duzib150G1114 Durio zibethinus
Duzib168G1973 Durio zibethinus
Duzib170G0819 Durio zibethinus
ECA233G5986 Erigeron canadensis
EL10Ac7g15802 Beta vulgaris
Eucgr.B03876 Eucalyptus grandis
FAN03G3037 Fragaria x ananassa
FAN06G4251 Fragaria x ananassa
FAN11G2495 Fragaria x ananassa
FAN16G3118 Fragaria x ananassa
FAN21G1062 Fragaria x ananassa
FAN25G0348 Fragaria x ananassa
FAN25G0520 Fragaria x ananassa
FAN25G0558 Fragaria x ananassa
FAN25G0964 Fragaria x ananassa
FvH4_3g24580 Fragaria vesca
FvH4_7g01610 Fragaria vesca
Glyma.12G183500 Glycine max
Glyma.13G317500 Glycine max
Gohir.A05G082000 Gossypium hirsutum
Gohir.A08G004600 Gossypium hirsutum
Gohir.D05G084900 Gossypium hirsutum
Gohir.D08G014900 Gossypium hirsutum
Gorai.004G009300 Gossypium raimondii
Gorai.009G086800 Gossypium raimondii
GSVIVG01036170001 Vitis vinifera
HanXRQChr13g0397211 Helianthus annuus
Haze_23407 Corylus avellana
HPP92_006803 Vanilla planifolia
Hund20872 Selenicereus undatus
Lalb_Chr01g0004811 Lupinus albus
Lalb_Chr03g0028001 Lupinus albus
Lalb_Chr19g0136621 Lupinus albus
Lj1A234G35 Lonicera japonica
Lj1C241G3 Lonicera japonica
Lj2C981T10 Lonicera japonica
Lj3g0014833 Lotus japonicus
Lsat_1_v5_gn_2_133321 Lactuca sativa
Lsat_1_v5_gn_6_40560 Lactuca sativa
Manes.04G005300 Manihot esculenta
Manes.11G160250 Manihot esculenta
Mapoly0043s0108 Marchantia polymorpha
MCO11G428 Micromonas commoda
MCO11G429 Micromonas commoda
MD00G1078300 Malus domestica
MD10G1043400 Malus domestica
Medtr2g086140 Medicago truncatula
Medtr4g053675 Medicago truncatula
MELO3C021430.2 Cucumis melo
Migut.D02350 Erythranthe guttata
MSTRG.18747 Avicennia marina
Nitab4.5_0000234g0130 Nicotiana tabacum
Nitab4.5_0002837g0010 Nicotiana tabacum
Nn1g08411 Nelumbo nucifera
Oeu038978.1 Olea europaea
Oeu038979.1 Olea europaea
Oeu058251.1 Olea europaea
Oeu058252.1 Olea europaea
Os09g0567700 Oryza sativa ssp. japonica
Peaxi162Scf00086g02615 Petunia axillaris
PGR102G2249 Punica granatum
PGSC0003DMG400007404 Solanum tuberosum
Phvul.005G125300 Phaseolus vulgaris
Potri.004G184900 Populus trichocarpa
Potri.009G144800 Populus trichocarpa
Pp3c16_16320 Physcomitrium patens
Pp3c27_1720 Physcomitrium patens
PRCOL_00000149 Prasinoderma coloniale
PRCOL_00000910 Prasinoderma coloniale
Prupe.8G049400 Prunus persica
Prupe.8G049500 Prunus persica
Prupe.8G049600 Prunus persica
Psat5g093200 Pisum sativum
Psat5g256560 Pisum sativum
PSO339G1552 Papaver somniferum
PSO384G0212 Papaver somniferum
QL01p012653 Quercus lobata
RcHm_v2.0_Chr1g0317731 Rosa chinensis
RcHm_v2.0_Chr1g0317741 Rosa chinensis
RcHm_v2.0_Chr5g0044121 Rosa chinensis
Rhsim13G0109800 Rhododendron simsii
Sabra04G0124700 Salix brachista
Sabra09G0112300 Salix brachista
Sabra09G0115000 Salix brachista
SalBow6G4040 Salvia bowleyana
Sc12g0004380 Simmondsia chinensis
Sed0027491 Sechium edule
SEGI_08454 Sequoiadendron giganteum
SEGI_40901 Sequoiadendron giganteum
SGA_v2.0_scaffold147G36366 Striga asiatica
SGA_v2.0_scaffold21G09652 Striga asiatica
SGA_v2.0_scaffold22G09887 Striga asiatica
SHI06109 Sapria himalayana
SMO139G0105 Selaginella moellendorffii
SMO165G0087 Selaginella moellendorffii
Solyc11g067200.2 Solanum lycopersicum
Sopen11g026900 Solanum pennellii
Sp5g16690 Schrenkiella parvula
Sp5g16710 Schrenkiella parvula
Sp5g16720 Schrenkiella parvula
TAR623G0259 Trochodendron aralioides
THA.LOC104810914 Tarenaya hassleriana
Thecc.09G286400 Theobroma cacao
Thhalv10010089m.g Eutrema salsugineum
TPR.G17239 Trifolium pratense
TPR.G23813 Trifolium pratense
TPR.G7702 Trifolium pratense
TWI31G1346 Tripterygium wilfordii
TWI79G1394 Tripterygium wilfordii
unitig_0.g1482 Utricularia gibba
vmacro03304 Vaccinium macrocarpon
VMungo1080G0029 Vigna mungo
Zm00001eb121570 Zea mays
Zm00001eb307860 Zea mays

User provided reference genes

Program Settings