Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p14110 Brassica napus
A03p29510 Brassica napus
A03p53850 Brassica napus
Aa31LG6G4960 Aethionema arabicum
Aa31LG9G10510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis
Actinidia02868 Actinidia chinensis
Actinidia05236 Actinidia chinensis
Actinidia14012 Actinidia chinensis
Actinidia27416 Actinidia chinensis
Ah.12g057870 Amaranthus hybridus
AL6G46730 Arabidopsis lyrata
AL7G30630 Arabidopsis lyrata
Aqoxy7G00504 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AG3Z3P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea
AT4G11960 Arabidopsis thaliana
AT4G22890 Arabidopsis thaliana
ATR0661G459 Amborella trichopoda
Atru.chr9.1500 Acer truncatum
AUR62010559 Chenopodium quinoa
AUR62017330 Chenopodium quinoa
BcaB01g02662 Brassica carinata
BcaC01g04611 Brassica carinata
BcaC02g09855 Brassica carinata
BcaC09g51065 Brassica carinata
BcaNung01019 Brassica carinata
BcaNung01664 Brassica carinata
BolC1t01675H Brassica oleracea
BolC3t15881H Brassica oleracea
BolC4t25212H Brassica oleracea
BolC7t45719H Brassica oleracea
BraA01t01359Z Brassica rapa
BraA03t12145Z Brassica rapa
BraA03t14454Z Brassica rapa
C01p17370 Brassica napus
C03p35720 Brassica napus
C04p35880 Brassica napus
C07p52250 Brassica napus
C07p59320 Brassica napus
CAN.G1394.10 Capsicum annuum
CAN.G981.62 Capsicum annuum
CANSAT21G0452 Cannabis sativa
CARHR229930 Cardamine hirsuta
CARHR254330 Cardamine hirsuta
Carub.0006s3106 Capsella rubella
Carub.0007s1839 Capsella rubella
Ca_20236_v3 Cicer arietinum L.
Ca_24565_v3 Cicer arietinum L.
CBR_g23735 Chara braunii
Cc08_g13730 Coffea canephora
CDE04G2291 Ceratophyllum demersum
CDE07G1293 Ceratophyllum demersum
CDE07G1747 Ceratophyllum demersum
Cfa012069 Carpinus fangiana
Ciclev10021127m.g Citrus clementina
CiPaw.11G143200 Carya illinoinensis
CiPaw.12G101000 Carya illinoinensis
ClCG00G000150 Citrullus lanatus
ClCG00G002290 Citrullus lanatus
ClCG10G003400 Citrullus lanatus
COL.COLO4_23800 Corchorus olitorius
Cpa.g.sc29.40 Carica papaya
Cre07.g340200 Chlamydomonas reinhardtii
CsaV3_3G003430 Cucumis sativus L.
CSS0001568 Camellia sinensis var. sinensis
CSS0018103 Camellia sinensis var. sinensis
DCAR_000890 Daucus carota
Dinv37708 Davidia involucrata
Dinv39038 Davidia involucrata
Duzib084G0949 Durio zibethinus
Duzib205G0169 Durio zibethinus
ECA240G4155 Erigeron canadensis
EL10Ac5g12684 Beta vulgaris
Eucgr.D01944 Eucalyptus grandis
FAN04G0845 Fragaria x ananassa
FAN08G0919 Fragaria x ananassa
FAN13G2490 Fragaria x ananassa
FAN18G3786 Fragaria x ananassa
FvH4_5g01180 Fragaria vesca
Glyma.01G214300 Glycine max
Glyma.05G051300 Glycine max
Glyma.12G170600 Glycine max
Glyma.17G133200 Glycine max
Gohir.A08G176900 Gossypium hirsutum
Gohir.A12G223566 Gossypium hirsutum
Gohir.A12G223632 Gossypium hirsutum
Gohir.D08G195200 Gossypium hirsutum
Gohir.D12G226200 Gossypium hirsutum
Gorai.004G206000 Gossypium raimondii
Gorai.008G242200 Gossypium raimondii
GSVIVG01019890001 Vitis vinifera
HanXRQChr03g0084111 Helianthus annuus
HanXRQChr13g0414021 Helianthus annuus
Haze_08989 Corylus avellana
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla
HPP92_014954 Vanilla planifolia
Hund14702 Selenicereus undatus
Lalb_Chr05g0214701 Lupinus albus
Lj2A202G55 Lonicera japonica
Lj2g0000892 Lotus japonicus
Lj4g0003870 Lotus japonicus
Lj8C243T4 Lonicera japonica
Lsat_1_v5_gn_6_78800 Lactuca sativa
Lsat_1_v5_gn_6_8180 Lactuca sativa
Lsat_1_v5_gn_8_1701 Lactuca sativa
Manes.01G070000 Manihot esculenta
Mapoly0048s0082 Marchantia polymorpha
MD04G1071000 Malus domestica
Medtr4g102440 Medicago truncatula
Medtr5g011220 Medicago truncatula
MELO3C014009.2 Cucumis melo
Migut.A00895 Erythranthe guttata
Migut.E01022 Erythranthe guttata
Migut.E01271 Erythranthe guttata
MSTRG.12034 Avicennia marina
MSTRG.13805 Avicennia marina
Nitab4.5_0001200g0070 Nicotiana tabacum
Nitab4.5_0002886g0120 Nicotiana tabacum
Nitab4.5_0003274g0090 Nicotiana tabacum
Nitab4.5_0010547g0050 Nicotiana tabacum
Nn1g01278 Nelumbo nucifera
Oeu021144.1 Olea europaea
Oeu056817.1 Olea europaea
Os03g0857400 Oryza sativa ssp. japonica
Os08g0310500 Oryza sativa ssp. japonica
Os08g0526300 Oryza sativa ssp. japonica
Peaxi162Scf00102g01354 Petunia axillaris
Peaxi162Scf00620g00056 Petunia axillaris
PGR031G0886 Punica granatum
PGSC0003DMG400012494 Solanum tuberosum
PGSC0003DMG400022731 Solanum tuberosum
Phvul.002G152800 Phaseolus vulgaris
Phvul.003G213900 Phaseolus vulgaris
Potri.001G113000 Populus trichocarpa
Potri.003G119200 Populus trichocarpa
Pp3c10_15390 Physcomitrium patens
Pp3c3_19870 Physcomitrium patens
Prupe.5G086900 Prunus persica
Psat2g180880 Pisum sativum
Psat4g068320 Pisum sativum
Psat6g136800 Pisum sativum
PSO478G4698 Papaver somniferum
PSO782G5713 Papaver somniferum
RcHm_v2.0_Chr7g0199911 Rosa chinensis
Rhsim07G0096500 Rhododendron simsii
Sabra03G0083200 Salix brachista
SalBow1G0491 Salvia bowleyana
SalBow6G0972 Salvia bowleyana
Sc22g0000420 Simmondsia chinensis
Sed0016409 Sechium edule
Sed0026462 Sechium edule
SEGI_18243 Sequoiadendron giganteum
SMO356G0021 Selaginella moellendorffii
Solyc08g007770.4 Solanum lycopersicum
Solyc08g080050.4 Solanum lycopersicum
Sopen08g003700 Solanum pennellii
Sopen08g028400 Solanum pennellii
Sp6g05550 Schrenkiella parvula
Sp7g20960 Schrenkiella parvula
TAR622G0836 Trochodendron aralioides
TAR629G0773 Trochodendron aralioides
THA.LOC104806356 Tarenaya hassleriana
THA.LOC104814132 Tarenaya hassleriana
Thecc.03G267900 Theobroma cacao
Thhalv10025739m.g Eutrema salsugineum
Thhalv10028695m.g Eutrema salsugineum
TPR.G14577 Trifolium pratense
TPR.G37646 Trifolium pratense
TWI60G0957 Tripterygium wilfordii
TWI81G0532 Tripterygium wilfordii
unitig_52.g17229 Utricularia gibba
unitig_699.g19760 Utricularia gibba
vmacro14015 Vaccinium macrocarpon
VMungo1215G1438 Vigna mungo
VMungo1215G3348 Vigna mungo
Zm00001eb064990 Zea mays
Zm00001eb065010 Zea mays
Zm00001eb065020 Zea mays
Zm00001eb305640 Zea mays

User provided reference genes

Program Settings