Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p36600 Brassica napus
Aa31LG4G17270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.578 Anthoceros agrestis
Actinidia03749 Actinidia chinensis
Actinidia07110 Actinidia chinensis
Actinidia24075 Actinidia chinensis
Ah.05g175890 Amaranthus hybridus
AL1G43750 Arabidopsis lyrata
Aqoxy7G00983 Aquilegia oxysepala
Aqoxy7G00992 Aquilegia oxysepala
Aqoxy84s009 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1XIG7Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F0P9EH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HT4L1Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SY27G3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YNZQ4S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z66RMF Arachis hypogaea
AT1G29900 Arabidopsis thaliana
ATR0561G124 Amborella trichopoda
ATR0609G052 Amborella trichopoda
Atru.chr3.3712 Acer truncatum
AUR62004284 Chenopodium quinoa
AUR62033373 Chenopodium quinoa
BcaB07g32573 Brassica carinata
BcaC03g16660 Brassica carinata
BcaC03g16789 Brassica carinata
BcaC05g27003 Brassica carinata
BolC2t10717H Brassica oleracea
BolC5t31587H Brassica oleracea
BraA09t39180Z Brassica rapa
C05p22330 Brassica napus
C05p28660 Brassica napus
CAN.G1001.10 Capsicum annuum
CAN.G1001.11 Capsicum annuum
CAN.G916.7 Capsicum annuum
CANSAT35G1266 Cannabis sativa
CARHR029540 Cardamine hirsuta
Carub.0001s2812 Capsella rubella
Ca_01436_v3 Cicer arietinum L.
Ca_28634_v3 Cicer arietinum L.
Ca_28703_v3 Cicer arietinum L.
CBR_g16075 Chara braunii
Cc01_g11620 Coffea canephora
Cc10_g16400 Coffea canephora
CDE02G3705 Ceratophyllum demersum
CDE08G0949 Ceratophyllum demersum
Cfa011369 Carpinus fangiana
Cfa011371 Carpinus fangiana
Cfa022738 Carpinus fangiana
Ciclev10027703m.g Citrus clementina
CiPaw.13G106400 Carya illinoinensis
ClCG09G021680 Citrullus lanatus
COL.COLO4_32786 Corchorus olitorius
Cpa.g.sc81.16 Carica papaya
Cre08.g358580 Chlamydomonas reinhardtii
CsaV3_7G021350 Cucumis sativus L.
CSS0000103 Camellia sinensis var. sinensis
CSS0002392 Camellia sinensis var. sinensis
CSS0031195 Camellia sinensis var. sinensis
CSS0048503 Camellia sinensis var. sinensis
DCAR_016522 Daucus carota
DCAR_026092 Daucus carota
Dinv14501 Davidia involucrata
Dinv14502 Davidia involucrata
Dinv32798 Davidia involucrata
Duzib168G1597 Durio zibethinus
Duzib170G0243 Durio zibethinus
Duzib213G0488 Durio zibethinus
ECA234G0865 Erigeron canadensis
EL10Ac1g00972 Beta vulgaris
Eucgr.F04457 Eucalyptus grandis
FAN26G3193 Fragaria x ananassa
FAN28G2851 Fragaria x ananassa
FvH4_1g25660 Fragaria vesca
Glyma.13G328600 Glycine max
Glyma.15G045100 Glycine max
Glyma.20G148741 Glycine max
Glyma.20G148781 Glycine max
Glyma.20G148821 Glycine max
Glyma.20G148861 Glycine max
Gohir.A01G060300 Gossypium hirsutum
Gohir.D01G046800 Gossypium hirsutum
Gorai.002G066300 Gossypium raimondii
GSVIVG01025125001 Vitis vinifera
HanXRQChr09g0251621 Helianthus annuus
HanXRQChr15g0493841 Helianthus annuus
Haze_23933 Corylus avellana
Haze_26134 Corylus avellana
Haze_26812 Corylus avellana
Haze_26994 Corylus avellana
HPP92_005503 Vanilla planifolia
Hund30148 Selenicereus undatus
Hund30149 Selenicereus undatus
Lalb_Chr14g0374811 Lupinus albus
Lalb_Chr22g0350161 Lupinus albus
Lalb_Chr24g0394441 Lupinus albus
Lj3g0017853 Lotus japonicus
Lj4A607T48 Lonicera japonica
Lj4C607T13 Lonicera japonica
Lj4C607T5 Lonicera japonica
Lsat_1_v5_gn_9_7920 Lactuca sativa
Manes.04G025400 Manihot esculenta
Mapoly0126s0034 Marchantia polymorpha
MBI17_g19523_MAGBIO Magnolia biondii
MBI17_g43655_MAGBIO Magnolia biondii
MBI17_g43656_MAGBIO Magnolia biondii
MCO07G210 Micromonas commoda
MD03G1111400 Malus domestica
MD03G1111500 Malus domestica
MD11G1125100 Malus domestica
MD12G1166200 Malus domestica
Medtr1946s0010 Medicago truncatula
Medtr2g093280 Medicago truncatula
MELO3C013218.2 Cucumis melo
Migut.N03234 Erythranthe guttata
MSTRG.22380 Avicennia marina
MSTRG.24196 Avicennia marina
Nitab4.5_0000106g0020 Nicotiana tabacum
Nitab4.5_0000816g0110 Nicotiana tabacum
Nitab4.5_0010336g0040 Nicotiana tabacum
Nitab4.5_0010960g0010 Nicotiana tabacum
Nn2g10669 Nelumbo nucifera
Nn2g13001 Nelumbo nucifera
Nn3g17258 Nelumbo nucifera
Nn3g19734 Nelumbo nucifera
Oeu046772.1 Olea europaea
Oeu047812.2 Olea europaea
Os01g0570700 Oryza sativa ssp. japonica
Peaxi162Scf00072g00510 Petunia axillaris
Peaxi162Scf00809g00417 Petunia axillaris
Peaxi162Scf00809g00429 Petunia axillaris
PGR031G3879 Punica granatum
PGSC0003DMG400007504 Solanum tuberosum
Phvul.005G137400 Phaseolus vulgaris
Potri.008G216501 Populus trichocarpa
Potri.010G023100 Populus trichocarpa
Pp3c1_18250 Physcomitrium patens
Pp3c2_19430 Physcomitrium patens
Pp3s34_280 Physcomitrium patens
Pp3s46_240 Physcomitrium patens
PRCOL_00001523 Prasinoderma coloniale
Prupe.6G093800 Prunus persica
Psat5g277200 Pisum sativum
PSO782G2702 Papaver somniferum
QL01p036935 Quercus lobata
RcHm_v2.0_Chr2g0124141 Rosa chinensis
RcHm_v2.0_Chr7g0219181 Rosa chinensis
Rhsim01G0220800 Rhododendron simsii
Sabra10G0015500 Salix brachista
SalBow6G4004 Salvia bowleyana
Sc12g0005790 Simmondsia chinensis
Sc12g0005800 Simmondsia chinensis
Sc12g0005810 Simmondsia chinensis
Sc12g0005820 Simmondsia chinensis
Sc12g0005830 Simmondsia chinensis
Sc12g0008310 Simmondsia chinensis
Sed0011385 Sechium edule
Sed0019661 Sechium edule
SEGI_13014 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08651 Striga asiatica
SHI06033 Sapria himalayana
SMO116G0138 Selaginella moellendorffii
SMO116G0226 Selaginella moellendorffii
Solyc06g075340.4 Solanum lycopersicum
Sopen06g031760 Solanum pennellii
Sp1g25780 Schrenkiella parvula
TAR369G0890 Trochodendron aralioides
TAR623G0185 Trochodendron aralioides
TAR633G0489 Trochodendron aralioides
TAR633G0585 Trochodendron aralioides
TAR633G1433 Trochodendron aralioides
TAR633G2225 Trochodendron aralioides
TAR633G2601 Trochodendron aralioides
TAR636G1956 Trochodendron aralioides
THA.LOC104800615 Tarenaya hassleriana
THA.LOC104826356 Tarenaya hassleriana
Thecc.07G099900 Theobroma cacao
Thhalv10006598m.g Eutrema salsugineum
TPR.G11612 Trifolium pratense
TWI31G0613 Tripterygium wilfordii
TWI75G0848 Tripterygium wilfordii
unitig_8.g4304 Utricularia gibba
vmacro14471 Vaccinium macrocarpon
VMungo1080G1458 Vigna mungo
Zm00001eb160030 Zea mays
Zm00001eb356970 Zea mays
Zm00001eb440860 Zea mays

User provided reference genes

Program Settings