Gene: Solyc06g075340.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g075340.4
- Transcript Identifier Solyc06g075340.4.1
- Gene Type Coding gene
- Location SL4.0ch06 : 44433973-44439367 : negative
Gene Family Information
- ID HOM05D003658
- #Genes/#Species 187/99
- Phylogenetic origin
- ID ORTHO05D004457
- #Genes/#Species 180/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc06g075340.4.1
- uniprot A0A3Q7H3D4
- gene_id Solyc06g075340
Descriptions
- Description Carbamoyl-phosphate synthase large chain-like protein (AHRD V3.3 *** A0A2K3P243_TRIPR)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016036 | ISO | PLAZA Integrative Orthology | cellular response to phosphate starvation | AT1G29900 |
| GO:0006807 | IBA IEA | GOA Database | nitrogen compound metabolic process | |
| GO:0006807 | IEA | InterPro | nitrogen compound metabolic process | |
| GO:0006541 | IBA | GOA Database | glutamine metabolic process | |
| GO:0006221 | IEA | GOA Database | pyrimidine nucleotide biosynthetic process | |
| GO:0044205 | IEA | GOA Database | 'de novo' UMP biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016874 | IEA | GOA Database | ligase activity | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0004088 | IEA | GOA Database | carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005951 | ISO | PLAZA Integrative Orthology | carbamoyl-phosphate synthase complex | AT1G29900 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G29900 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT1G29900 |
| GO:0005737 | IBA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005479 | Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain |
| IPR036897 | Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily |
| IPR005483 | Carbamoyl-phosphate synthase large subunit, CPSase domain |
| IPR011607 | Methylglyoxal synthase-like domain |
| IPR033937 | Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain |
| IPR036914 | Methylglyoxal synthase-like domain superfamily |
| IPR006275 | Carbamoyl-phosphate synthase, large subunit |
| IPR016185 | Pre-ATP-grasp domain superfamily |
| IPR005480 | Carbamoyl-phosphate synthetase, large subunit oligomerisation domain |
| IPR013815 | ATP-grasp fold, subdomain 1 |
| Mapman id | Description |
|---|---|
| 4.1.1.1.2.1.1 | Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.carbamoyl phosphate synthetase heterodimer.large subunit |
| 6.2.1.1.1 | Nucleotide metabolism.pyrimidines.de novo biosynthesis.carbamoyl phosphate synthetase heterodimer.large subunit |