Gene: Sopen06g031760

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g031760
  • Transcript Identifier Sopen06g031760.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 57629566-57634967 : negative

Gene Family Information

  • ID HOM05D003658
  • #Genes/#Species 187/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g031760.1

Descriptions

  • Description carbamoyl phosphate synthetase large chain (CARB) mRNA, | carbamoyl phosphate synthetase B (CARB) | FUNCTIONS IN: catalytic activity, ATP binding | INVOLVED IN: cellular response to phosphate starvation, arginine biosynthetic process | LOCATED IN: chloroplast stroma, chloroplast, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal , Carbamoyl phosphate synthetase, large subunit, ATP-binding , MGS-like , PreATP-grasp-like fold , Carbamoyl phosphate synthetase, large subunit, oligomerisation , Carbamoyl phosphate synthase, large subunit, glutamine-dependent , ATP-grasp fold , ATP-grasp fold, subdomain 2 , Carbamoyl phosphate synthase, large subunit , Pre-ATP-grasp fold | BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006807
IEA
InterPronitrogen compound metabolic process
GO:0016036
ISO
PLAZA Integrative Orthologycellular response to phosphate starvation AT1G29900

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0004088
ISO
PLAZA Integrative Orthologycarbamoyl-phosphate synthase (glutamine-hydrolyzing) activity AT1G29900

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G29900
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G29900
GO:0005951
ISO
PLAZA Integrative Orthologycarbamoyl-phosphate synthase complex AT1G29900

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain
IPR013815 ATP-grasp fold, subdomain 1
IPR011607 Methylglyoxal synthase-like domain
IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain
IPR036914 Methylglyoxal synthase-like domain superfamily
IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily
IPR016185 Pre-ATP-grasp domain superfamily
IPR006275 Carbamoyl-phosphate synthase, large subunit
IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain
IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain
Mapman id Description
4.1.1.1.2.1.1 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.carbamoyl phosphate synthetase heterodimer.large subunit
6.2.1.1.1 Nucleotide metabolism.pyrimidines.de novo biosynthesis.carbamoyl phosphate synthetase heterodimer.large subunit