Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p05420 Brassica napus
A10p06220 Brassica napus
Aa31LG2G15030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3442 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3338 Anthoceros agrestis
Actinidia06069 Actinidia chinensis
Actinidia15651 Actinidia chinensis
Actinidia15652 Actinidia chinensis
Actinidia15653 Actinidia chinensis
Actinidia23574 Actinidia chinensis
Actinidia26218 Actinidia chinensis
Actinidia37036 Actinidia chinensis
Actinidia38747 Actinidia chinensis
Ah.11g044900 Amaranthus hybridus
AL1G16300 Arabidopsis lyrata
AL6G33080 Arabidopsis lyrata
Aqoxy3G03267 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3N5Q80 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.57UCU4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FG3FW1 Arachis hypogaea
AT5G22100 Arabidopsis thaliana
ATR0097G041 Amborella trichopoda
Atru.chr3.3108 Acer truncatum
Atru.chr9.1898 Acer truncatum
AUR62025912 Chenopodium quinoa
AUR62029643 Chenopodium quinoa
BcaB04g17480 Brassica carinata
BcaB07g33815 Brassica carinata
BcaC07g37193 Brassica carinata
BcaC08g42972 Brassica carinata
BolC6t35344H Brassica oleracea
BolC8t47419H Brassica oleracea
BraA08t32548Z Brassica rapa
BraA10t42890Z Brassica rapa
C06p02140 Brassica napus
C08p05880 Brassica napus
CAN.G953.11 Capsicum annuum
CAN.G953.12 Capsicum annuum
CARHR072400 Cardamine hirsuta
CARHR191430 Cardamine hirsuta
Carub.0006s1974 Capsella rubella
Ca_12888_v3 Cicer arietinum L.
CBR_g11105 Chara braunii
Cc07_g02990 Coffea canephora
CDE01G0277 Ceratophyllum demersum
CDE12G0385 Ceratophyllum demersum
Cfa010173 Carpinus fangiana
Cfa021454 Carpinus fangiana
Cfa022309 Carpinus fangiana
Ciclev10028663m.g Citrus clementina
CiPaw.08G137600 Carya illinoinensis
CiPaw.14G095200 Carya illinoinensis
ClCG03G012190 Citrullus lanatus
COL.COLO4_25421 Corchorus olitorius
Cpa.g.sc56.89 Carica papaya
Cre01.g053288 Chlamydomonas reinhardtii
Cre09.g400367 Chlamydomonas reinhardtii
CsaV3_1G043830 Cucumis sativus L.
CSS0017931 Camellia sinensis var. sinensis
CSS0035358 Camellia sinensis var. sinensis
DCAR_025365 Daucus carota
Dinv15534 Davidia involucrata
Duzib168G1975 Durio zibethinus
ECA232G0193 Erigeron canadensis
ECA232G4075 Erigeron canadensis
EL10Ac2g02713 Beta vulgaris
EL10Ac4g08784 Beta vulgaris
EL10Ac6g13118 Beta vulgaris
EL10As4g23426 Beta vulgaris
EL10As8g23847 Beta vulgaris
Eucgr.B03813 Eucalyptus grandis
FAN16G1741 Fragaria x ananassa
FAN21G1855 Fragaria x ananassa
FAN25G1502 Fragaria x ananassa
FvH4_3g12140 Fragaria vesca
Glyma.01G143200 Glycine max
Glyma.07G212600 Glycine max
Glyma.13G179100 Glycine max
Gohir.A09G099800 Gossypium hirsutum
Gohir.D09G099200 Gossypium hirsutum
Gorai.006G116200 Gossypium raimondii
GSVIVG01032606001 Vitis vinifera
HanXRQChr11g0321781 Helianthus annuus
Haze_23560 Corylus avellana
Haze_27241 Corylus avellana
Hma1.2p1_0199F.1_g085800 Hydrangea macrophylla
HPP92_000027 Vanilla planifolia
HPP92_000028 Vanilla planifolia
HPP92_000031 Vanilla planifolia
HPP92_000050 Vanilla planifolia
HPP92_001388 Vanilla planifolia
HPP92_027915 Vanilla planifolia
HPP92_027916 Vanilla planifolia
HPP92_028030 Vanilla planifolia
HPP92_028227 Vanilla planifolia
HPP92_028228 Vanilla planifolia
Hund15639 Selenicereus undatus
Lalb_Chr09g0327341 Lupinus albus
Lj2A610G28 Lonicera japonica
Lj2g0019396 Lotus japonicus
Lj2g0023176 Lotus japonicus
Lsat_1_v5_gn_2_114700 Lactuca sativa
Lsat_1_v5_gn_2_70781 Lactuca sativa
Lsat_1_v5_gn_4_134160 Lactuca sativa
Lsat_1_v5_gn_6_85780 Lactuca sativa
Manes.04G047600 Manihot esculenta
Mapoly0008s0094 Marchantia polymorpha
Mapoly0071s0005 Marchantia polymorpha
Mapoly0187s0002 Marchantia polymorpha
MBI14_g02806_MAGBIO Magnolia biondii
MBI14_g41488_MAGBIO Magnolia biondii
MCO04G339 Micromonas commoda
MCO16G220 Micromonas commoda
MD05G1254500 Malus domestica
MD10G1234700 Malus domestica
MD11G1147100 Malus domestica
Medtr8g098715 Medicago truncatula
MELO3C015060.2 Cucumis melo
Migut.H00888 Erythranthe guttata
MSTRG.12186 Avicennia marina
Nitab4.5_0005797g0050 Nicotiana tabacum
Nitab4.5_0010866g0010 Nicotiana tabacum
Nn8g40776 Nelumbo nucifera
Oeu018673.1 Olea europaea
Os03g0833700 Oryza sativa ssp. japonica
Peaxi162Scf00683g00345 Petunia axillaris
PGR102G2752 Punica granatum
PGSC0003DMG400006605 Solanum tuberosum
PGSC0003DMG400021209 Solanum tuberosum
Phvul.002G221600 Phaseolus vulgaris
Phvul.002G299004 Phaseolus vulgaris
Potri.001G216400 Populus trichocarpa
Potri.009G016000 Populus trichocarpa
Pp3c13_13150 Physcomitrium patens
Pp3c15_22440 Physcomitrium patens
PRCOL_00003579 Prasinoderma coloniale
PRCOL_00006339 Prasinoderma coloniale
Prupe.4G110100 Prunus persica
Prupe.6G111200 Prunus persica
Prupe.6G112100 Prunus persica
Psat7g031640 Pisum sativum
PSO063G0318 Papaver somniferum
PSO170G5263 Papaver somniferum
PSO170G6031 Papaver somniferum
QL05p062772 Quercus lobata
QL93p1877_0036 Quercus lobata
RcHm_v2.0_Chr5g0019871 Rosa chinensis
Rhsim08G0066100 Rhododendron simsii
Sabra16G0127400 Salix brachista
SalBow1G0615 Salvia bowleyana
SalBow1G3035 Salvia bowleyana
SalBow8G4485 Salvia bowleyana
Sc10g0003820 Simmondsia chinensis
Sed0017179 Sechium edule
SEGI_12129 Sequoiadendron giganteum
SGA_v2.0_scaffold135G34778 Striga asiatica
SHI03441 Sapria himalayana
SHI25258 Sapria himalayana
SMO004G0007 Selaginella moellendorffii
SMO065G0004 Selaginella moellendorffii
SMO112G0083 Selaginella moellendorffii
SMO112G0124 Selaginella moellendorffii
SMO114G0139 Selaginella moellendorffii
SMO144G0146 Selaginella moellendorffii
SMO146G0031 Selaginella moellendorffii
SMO163G0016 Selaginella moellendorffii
SMO169G0251 Selaginella moellendorffii
SMO194G0041 Selaginella moellendorffii
SMO201G0018 Selaginella moellendorffii
SMO265G0024 Selaginella moellendorffii
SMO269G0020 Selaginella moellendorffii
SMO330G0055 Selaginella moellendorffii
SMO340G0317 Selaginella moellendorffii
SMO353G0041 Selaginella moellendorffii
SMO361G0623 Selaginella moellendorffii
SMO364G0656 Selaginella moellendorffii
SMO364G0671 Selaginella moellendorffii
Solyc02g069340.4 Solanum lycopersicum
Sopen02g018490 Solanum pennellii
Sp6g23090 Schrenkiella parvula
TAR374G0291 Trochodendron aralioides
TAR481G0007 Trochodendron aralioides
THA.LOC104809596 Tarenaya hassleriana
Thecc.09G271900 Theobroma cacao
Thhalv10013826m.g Eutrema salsugineum
Thhalv10028736m.g Eutrema salsugineum
Thhalv10029476m.g Eutrema salsugineum
TPR.G12888 Trifolium pratense
TWI79G0225 Tripterygium wilfordii
unitig_21.g20948 Utricularia gibba
vmacro18212 Vaccinium macrocarpon
VMungo0251G0431 Vigna mungo
VMungo0720G0165 Vigna mungo
Zm00001eb316080 Zea mays

User provided reference genes

Program Settings