Gene: COL.COLO4_25421

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_25421
  • Transcript Identifier COL.rna24153
  • Gene Type Coding gene
  • Location AWUE01019033.1 : 23012-27045 : positive

Gene Family Information

  • ID HOM05D003501
  • #Genes/#Species 194/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna24153
  • GenBank OMO76979.1
  • id gene25393
  • gene_name COLO4_25421
  • uniprot A0A1R3I357

Descriptions

  • Description RNA 3'-terminal phosphate cyclase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0042254
IEA
InterProribosome biogenesis
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IEA
GOA Databasenucleolus
GO:0005730
IEA
InterPronucleolus
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000228 RNA 3'-terminal phosphate cyclase
IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily
IPR016443 RNA 3'-terminal phosphate cyclase type 2
IPR023797 RNA 3'-terminal phosphate cyclase domain
IPR013791 RNA 3'-terminal phosphate cyclase, insert domain
IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily
IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
Mapman id Description
35.1 not assigned.annotated