Gene: PGSC0003DMG400021209

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400021209
  • Transcript Identifier PGSC0003DMT400054658
  • Gene Type Coding gene
  • Location ST4.03ch02 : 28477294-28480606 : positive

Gene Family Information

  • ID HOM05D003501
  • #Genes/#Species 194/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37427485
  • id PGSC0003DMG400021209.v4.03
  • uniprot M1BWN9

Descriptions

  • Description RNA 3' terminal phosphate cyclase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0042254
IEA
InterProribosome biogenesis
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0000479
IBA
GOA Databaseendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0004521
IBA
GOA Databaseendoribonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IBA
IEA
GOA Databasenucleolus
GO:0005730
IEA
InterPronucleolus
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016443 RNA 3'-terminal phosphate cyclase type 2
IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily
IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
IPR013791 RNA 3'-terminal phosphate cyclase, insert domain
IPR000228 RNA 3'-terminal phosphate cyclase
IPR023797 RNA 3'-terminal phosphate cyclase domain
IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily
Mapman id Description
35.1 not assigned.annotated