Gene: AT5G22100

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G22100
  • Transcript Identifier AT5G22100.1
  • Gene Type Coding gene
  • Location Chr5 : 7329015-7330718 : positive

Gene Family Information

  • ID HOM05D003501
  • #Genes/#Species 194/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G22100.1
  • uniprot Q9C578

Descriptions

  • Description RNA cyclase family protein
  • Computational description RNA cyclase family protein; FUNCTIONS IN: RNA-3'-phosphate cyclase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA 3'-terminal phosphate cyclase-like, conserved site (InterPro:IPR020719), RNA 3'-terminal phosphate cyclase-like (InterPro:IPR000228), RNA 3'-terminal phosphate cyclase, insert domain (InterPro:IPR013796), RNA 3'-terminal phosphate cyclase-like, eukaryotic (InterPro:IPR016443), RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (InterPro:IPR013792); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000479
IBA
Gene Ontologyendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0042254
IEA
InterProribosome biogenesis
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004521
IBA
Gene Ontologyendoribonuclease activity1
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IEA
GOA Databasenucleolus
GO:0005730
IBA
Gene Ontologynucleolus1
GO:0005730
IEA
InterPronucleolus
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013791 RNA 3'-terminal phosphate cyclase, insert domain
IPR016443 RNA 3'-terminal phosphate cyclase type 2
IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily
IPR023797 RNA 3'-terminal phosphate cyclase domain
IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily
IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
IPR000228 RNA 3'-terminal phosphate cyclase
Mapman id Description
35.1 not assigned.annotated