Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p27200 Brassica napus
A07p44380 Brassica napus
Aa31LG4G1710 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3653 Anthoceros agrestis
Actinidia26203 Actinidia chinensis
Ah.09g236940 Amaranthus hybridus
AL2G39750 Arabidopsis lyrata
AL2G39760 Arabidopsis lyrata
AL2G39880 Arabidopsis lyrata
AL8G20460 Arabidopsis lyrata
Aqoxy1G01362 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DHQL63 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LW990M Arachis hypogaea
AT1G79280 Arabidopsis thaliana
ATR1127G224 Amborella trichopoda
Atru.chr1.17 Acer truncatum
AUR62012541 Chenopodium quinoa
AUR62014655 Chenopodium quinoa
AUR62018106 Chenopodium quinoa
AUR62044736 Chenopodium quinoa
BcaB02g07209 Brassica carinata
BcaC08g45365 Brassica carinata
BolC6t38157H Brassica oleracea
BolC6t40336H Brassica oleracea
BraA07t30364Z Brassica rapa
BraA07t31947Z Brassica rapa
C06p29970 Brassica napus
C06p53180 Brassica napus
CAN.G374.15 Capsicum annuum
CANSAT56G3760 Cannabis sativa
CARHR072950 Cardamine hirsuta
Carub.0002s2615 Capsella rubella
Ca_03376_v3 Cicer arietinum L.
Ca_03377_v3 Cicer arietinum L.
CBR_g33916 Chara braunii
CBR_g33917 Chara braunii
Cc00_g09120 Coffea canephora
CDE02G3941 Ceratophyllum demersum
CDE05G0263 Ceratophyllum demersum
CDE05G2470 Ceratophyllum demersum
Cfa017771 Carpinus fangiana
Ciclev10006542m.g Citrus clementina
CiPaw.15G111600 Carya illinoinensis
CiPaw.16G079000 Carya illinoinensis
ClCG09G022890 Citrullus lanatus
COL.COLO4_25003 Corchorus olitorius
COL.COLO4_35707 Corchorus olitorius
Cpa.g.c34987 Carica papaya
Cpa.g.c39206 Carica papaya
Cpa.g.sc2332.1 Carica papaya
Cpa.g.sc31.23 Carica papaya
Cpa.g.sc569.2 Carica papaya
CsaV3_7G023140 Cucumis sativus L.
DCAR_013704 Daucus carota
Dinv19570 Davidia involucrata
Dinv42452 Davidia involucrata
Duzib213G0086 Durio zibethinus
ECA233G1650 Erigeron canadensis
EL10Ac8g19951 Beta vulgaris
Eucgr.F04480 Eucalyptus grandis
FAN11G2210 Fragaria x ananassa
FAN16G2389 Fragaria x ananassa
FAN21G2046 Fragaria x ananassa
FAN25G2460 Fragaria x ananassa
FvH4_3g13850 Fragaria vesca
Glyma.08G162300 Glycine max
Glyma.08G234500 Glycine max
Glyma.15G265300 Glycine max
Gohir.A01G100800 Gossypium hirsutum
Gohir.D01G085300 Gossypium hirsutum
Gorai.002G110900 Gossypium raimondii
GSVIVG01036698001 Vitis vinifera
HanXRQChr08g0213121 Helianthus annuus
HanXRQChr11g0329221 Helianthus annuus
HanXRQChr14g0459251 Helianthus annuus
Haze_18466 Corylus avellana
Haze_18467 Corylus avellana
Haze_18469 Corylus avellana
Hma1.2p1_0151F.1_g066930 Hydrangea macrophylla
HPP92_017337 Vanilla planifolia
HPP92_017338 Vanilla planifolia
HPP92_017348 Vanilla planifolia
HPP92_017349 Vanilla planifolia
Hund21305 Selenicereus undatus
Lalb_Chr01g0015591 Lupinus albus
Lalb_Chr25g0284181 Lupinus albus
Lj2A6T29 Lonicera japonica
Lj2C7G1 Lonicera japonica
Lj3g0013318 Lotus japonicus
Lj3g0016310 Lotus japonicus
Lsat_1_v5_gn_8_41780 Lactuca sativa
Manes.16G052800 Manihot esculenta
Mapoly0042s0082 Marchantia polymorpha
Mapoly2166s0001 Marchantia polymorpha
MBI02_g17882_MAGBIO Magnolia biondii
MBI02_g17883_MAGBIO Magnolia biondii
MBI02_g18804_MAGBIO Magnolia biondii
MBI02_g41948_MAGBIO Magnolia biondii
MBI03_g24553_MAGBIO Magnolia biondii
MBI05_g00256_MAGBIO Magnolia biondii
MBI07_g03081_MAGBIO Magnolia biondii
MBI07_g23017_MAGBIO Magnolia biondii
MBI08_g05404_MAGBIO Magnolia biondii
MBI09_g19699_MAGBIO Magnolia biondii
MBI09_g40770_MAGBIO Magnolia biondii
MBI10_g08630_MAGBIO Magnolia biondii
MBI10_g16742_MAGBIO Magnolia biondii
MBI11_g19183_MAGBIO Magnolia biondii
MBI11_g20914_MAGBIO Magnolia biondii
MBI12_g17629_MAGBIO Magnolia biondii
MBI14_g41599_MAGBIO Magnolia biondii
MBI15_g27814_MAGBIO Magnolia biondii
MBI15_g27815_MAGBIO Magnolia biondii
MBI16_g14341_MAGBIO Magnolia biondii
MBI16_g34347_MAGBIO Magnolia biondii
MBI17_g19041_MAGBIO Magnolia biondii
MBI17_g36742_MAGBIO Magnolia biondii
MBI18_g13000_MAGBIO Magnolia biondii
MBI18_g14996_MAGBIO Magnolia biondii
MBI18_g18638_MAGBIO Magnolia biondii
MBI18_g27146_MAGBIO Magnolia biondii
MBI18_g33844_MAGBIO Magnolia biondii
MBI19_g14704_MAGBIO Magnolia biondii
MBI19_g17783_MAGBIO Magnolia biondii
MBI19_g46841_MAGBIO Magnolia biondii
MCO03G110 Micromonas commoda
MD05G1240600 Malus domestica
MD10G1218600 Malus domestica
MD10G1218800 Malus domestica
MD10G1219000 Malus domestica
Medtr2g063480 Medicago truncatula
Medtr2g450170 Medicago truncatula
MELO3C000424.2 Cucumis melo
MELO3C012583.2 Cucumis melo
MELO3C012602.2 Cucumis melo
Migut.H01651 Erythranthe guttata
MSTRG.14572 Avicennia marina
Nitab4.5_0002333g0110 Nicotiana tabacum
Nitab4.5_0005627g0040 Nicotiana tabacum
Nn7g38420 Nelumbo nucifera
Oeu025989.1 Olea europaea
Oeu025990.2 Olea europaea
Os02g0741500 Oryza sativa ssp. japonica
Peaxi162Scf00579g00316 Petunia axillaris
PGR031G3814 Punica granatum
PGSC0003DMG400016328 Solanum tuberosum
Phvul.005G045700 Phaseolus vulgaris
Phvul.011G179600 Phaseolus vulgaris
Potri.008G080900 Populus trichocarpa
Pp3c8_8020 Physcomitrium patens
PRCOL_00003349 Prasinoderma coloniale
Prupe.4G125000 Prunus persica
Psat0s13g0320 Pisum sativum
PSO384G0674 Papaver somniferum
PSO541G3284 Papaver somniferum
PSO675G8338 Papaver somniferum
QL04p095880 Quercus lobata
RcHm_v2.0_Chr5g0023031 Rosa chinensis
Rhsim02G0129800 Rhododendron simsii
Rhsim06G0244900 Rhododendron simsii
Rhsim09G0000500 Rhododendron simsii
Rhsim12G0215500 Rhododendron simsii
Sabra08G0060200 Salix brachista
SalBow6G0003 Salvia bowleyana
SalBow6G2443 Salvia bowleyana
SalBow6G3979 Salvia bowleyana
Sc05g0008250 Simmondsia chinensis
Sc21g0005210 Simmondsia chinensis
Sed0001737 Sechium edule
SEGI_27786 Sequoiadendron giganteum
SEGI_36052 Sequoiadendron giganteum
SEGI_41216 Sequoiadendron giganteum
SGA_v2.0_scaffold167G38468 Striga asiatica
SGA_v2.0_scaffold239G43999 Striga asiatica
SHI33381 Sapria himalayana
SMO203G0250 Selaginella moellendorffii
Solyc06g053570.2 Solanum lycopersicum
Solyc06g053590.4 Solanum lycopersicum
Sopen06g018680 Solanum pennellii
Sp5g34360 Schrenkiella parvula
TAR626G0290 Trochodendron aralioides
THA.LOC104813306 Tarenaya hassleriana
Thecc.07G189900 Theobroma cacao
Thhalv10017995m.g Eutrema salsugineum
TPR.G3598 Trifolium pratense
TWI38G0606 Tripterygium wilfordii
unitig_578.g16338 Utricularia gibba
vmacro21306 Vaccinium macrocarpon
vmacro21307 Vaccinium macrocarpon
VMungo0720G1191 Vigna mungo
VMungo1080G1290 Vigna mungo
VMungo1127G1025 Vigna mungo
VMungo1127G1758 Vigna mungo
Zm00001eb194730 Zea mays

User provided reference genes

Program Settings