Gene: Sopen06g018680

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g018680
  • Transcript Identifier Sopen06g018680.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 45951389-45957821 : positive

Gene Family Information

  • ID HOM05D003499
  • #Genes/#Species 194/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g018680.1

Descriptions

  • Description Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development. | nuclear pore anchor (NUA) | CONTAINS InterPro DOMAIN/s: Tetratricopeptide, MLP1/MLP2-like ., Tetratricopeptide, MLP1/MLP2-like
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006606
IEA
InterProprotein import into nucleus
GO:0048443
ISO
PLAZA Integrative Orthologystamen development AT1G79280
GO:0033234
ISO
PLAZA Integrative Orthologynegative regulation of protein sumoylation AT1G79280
GO:0060968
ISO
PLAZA Integrative Orthologyregulation of gene silencing AT1G79280
GO:0009910
ISO
PLAZA Integrative Orthologynegative regulation of flower development AT1G79280
GO:0016973
ISO
PLAZA Integrative Orthologypoly(A)+ mRNA export from nucleus AT1G79280

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G79280

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT1G79280
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G79280
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G79280
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G79280

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012929 Nucleoprotein TPR/MLP1
Mapman id Description
23.5.1.1.5.2 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.nucleoporin (NUA)