Gene: AT1G79280

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G79280
  • Transcript Identifier AT1G79280.1
  • Gene Type Coding gene
  • Location Chr1 : 29819176-29832809 : negative

Gene Family Information

  • ID HOM05D003499
  • #Genes/#Species 194/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G79280.1
  • symbol NUA
  • Alias AtTPR,TRANSLOCATED PROMOTER REGION
  • uniprot A4GSN8

Descriptions

  • Description nuclear pore anchor
  • Computational description nuclear pore anchor (NUA); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: poly(A) mRNA export from nucleus, stamen development, negative regulation of protein sumoylation, negative regulation of flower development; LOCATED IN: cytosol, nuclear envelope, nucleolus, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide, MLP1/MLP2-like (InterPro:IPR012929); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006606
IEA
Gene Ontologyprotein import into nucleus
GO:0006606
IEA
InterProprotein import into nucleus
GO:0015031
IEA
GOA Databaseprotein transport
GO:0051028
IEA
GOA DatabasemRNA transport
GO:0006406
IBA
Gene OntologymRNA export from nucleus1
GO:0060968
IMP
Gene Ontologyregulation of gene silencing2
GO:0048443
IMP
Gene Ontologystamen development3
GO:0033234
IMP
Gene Ontologynegative regulation of protein sumoylation3
GO:0016973
IMP
Gene Ontologypoly(A)+ mRNA export from nucleus3
GO:0009910
IMP
Gene Ontologynegative regulation of flower development3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017056
IBA
Gene Ontologystructural constituent of nuclear pore1
GO:0005515
IPI
Gene Ontologyprotein binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005643
IEA
GOA Databasenuclear pore
GO:0005643
IBA
Gene Ontologynuclear pore1
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0016020
IEA
GOA Databasemembrane
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma5
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
RCA
Gene Ontologycytosol6
GO:0005730
IDA
GOA Databasenucleolus
GO:0005730
HDA
Gene Ontologynucleolus7
GO:0031965
IEA
GOA Databasenuclear membrane
GO:0005635
IEA
GOA Databasenuclear envelope
GO:0005635
IDA
Gene Ontologynuclear envelope3
GO:0005739
HDA
Gene Ontologymitochondrion8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012929 Nucleoprotein TPR/MLP1
Mapman id Description
23.5.1.1.5.2 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.nucleoporin (NUA)