Gene: PGSC0003DMG400016328
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400016328
- Transcript Identifier PGSC0003DMT400042104
- Gene Type Coding gene
- Location ST4.03ch06 : 39530975-39537385 : positive
Gene Family Information
- ID HOM05D003499
- #Genes/#Species 194/98
- Phylogenetic origin
- ID ORTHO05D004754
- #Genes/#Species 172/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 37453643
- id PGSC0003DMG400016328.v4.03
- uniprot M1BCI8
Descriptions
- Description Nuclear-pore anchor
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006606 | IEA | GOA Database | protein import into nucleus | |
| GO:0006606 | IEA | InterPro | protein import into nucleus | |
| GO:0006406 | IBA | GOA Database | mRNA export from nucleus | |
| GO:0048443 | ISO | PLAZA Integrative Orthology | stamen development | AT1G79280 |
| GO:0033234 | ISO | PLAZA Integrative Orthology | negative regulation of protein sumoylation | AT1G79280 |
| GO:0060968 | ISO | PLAZA Integrative Orthology | regulation of gene silencing | AT1G79280 |
| GO:0009910 | ISO | PLAZA Integrative Orthology | negative regulation of flower development | AT1G79280 |
| GO:0016973 | ISO | PLAZA Integrative Orthology | poly(A)+ mRNA export from nucleus | AT1G79280 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017056 | IBA | GOA Database | structural constituent of nuclear pore | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G79280 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005643 | IBA | GOA Database | nuclear pore | |
| GO:0005635 | ISO | PLAZA Integrative Orthology | nuclear envelope | AT1G79280 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G79280 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G79280 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G79280 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012929 | Nucleoprotein TPR/MLP1 |
| Mapman id | Description |
|---|---|
| 23.5.1.1.5.2 | Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.nucleoporin (NUA) |