Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p38760 Brassica napus
A03p39310 Brassica napus
A05p33960 Brassica napus
Aa31LG10G2140 Aethionema arabicum
Aa31LG8G2690 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2838 Anthoceros agrestis
Actinidia09989 Actinidia chinensis
Ah.01g001850 Amaranthus hybridus
AL1G61260 Arabidopsis lyrata
AL3G28010 Arabidopsis lyrata
Aqoxy4G01062 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L3HXPU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LC97RS Arachis hypogaea
AT1G52930 Arabidopsis thaliana
AT3G15460 Arabidopsis thaliana
ATR0605G144 Amborella trichopoda
AUR62015117 Chenopodium quinoa
AUR62017579 Chenopodium quinoa
BcaB04g20924 Brassica carinata
BcaB06g29576 Brassica carinata
BcaB06g29579 Brassica carinata
BcaC01g02821 Brassica carinata
BcaC01g02922 Brassica carinata
BcaC01g03873 Brassica carinata
BcaC09g48510 Brassica carinata
BolC1t04864H Brassica oleracea
BolC3t17044H Brassica oleracea
BolC5t33857H Brassica oleracea
BraA01t03909Z Brassica rapa
BraA03t13081Z Brassica rapa
BraA05t22218Z Brassica rapa
C01p42100 Brassica napus
C01p49000 Brassica napus
C03p47690 Brassica napus
C03p58350 Brassica napus
C05p51700 Brassica napus
CAN.G1237.13 Capsicum annuum
CANSAT78G2387 Cannabis sativa
CARHR043150 Cardamine hirsuta
CARHR090510 Cardamine hirsuta
Carub.0001s4208 Capsella rubella
Carub.0003s1518 Capsella rubella
Ca_05552_v3 Cicer arietinum L.
Ca_13044_v3 Cicer arietinum L.
CBR_g29800 Chara braunii
Cc05_g12350 Coffea canephora
CDE04G2177 Ceratophyllum demersum
CDE04G2432 Ceratophyllum demersum
CDE07G1591 Ceratophyllum demersum
Cfa020548 Carpinus fangiana
Cfa025477 Carpinus fangiana
Ciclev10008977m.g Citrus clementina
CiPaw.11G173200 Carya illinoinensis
CiPaw.12G120800 Carya illinoinensis
ClCG01G010880 Citrullus lanatus
ClCG03G016840 Citrullus lanatus
COL.COLO4_09433 Corchorus olitorius
Cpa.g.sc80.31 Carica papaya
Cre02.g095400 Chlamydomonas reinhardtii
CsaV3_1G039130 Cucumis sativus L.
CsaV3_2G014790 Cucumis sativus L.
CsaV3_5G020630 Cucumis sativus L.
CsaV3_7G022570 Cucumis sativus L.
CSS0016315 Camellia sinensis var. sinensis
DCAR_019542 Daucus carota
DCAR_019543 Daucus carota
DCAR_020982 Daucus carota
Dinv08315 Davidia involucrata
Duzib170G0474 Durio zibethinus
Duzib213G0358 Durio zibethinus
ECA236G4345 Erigeron canadensis
EL10Ac9g22818 Beta vulgaris
Eucgr.F01099 Eucalyptus grandis
FAN11G3195 Fragaria x ananassa
FAN16G2559 Fragaria x ananassa
FAN21G0310 Fragaria x ananassa
FAN25G0934 Fragaria x ananassa
FvH4_3g20570 Fragaria vesca
Glyma.02G114000 Glycine max
Glyma.08G255000 Glycine max
Glyma.18G278000 Glycine max
Gohir.A04G028400 Gossypium hirsutum
Gohir.A11G282773 Gossypium hirsutum
Gohir.D11G296500 Gossypium hirsutum
Gorai.007G319600 Gossypium raimondii
GSVIVG01028448001 Vitis vinifera
HanXRQChr10g0306991 Helianthus annuus
HanXRQChr12g0374331 Helianthus annuus
Haze_07077 Corylus avellana
Haze_09473 Corylus avellana
Haze_09477 Corylus avellana
Haze_26676 Corylus avellana
Hma1.2p1_0400F.1_g144660 Hydrangea macrophylla
Hma1.2p1_0687F.1_g203600 Hydrangea macrophylla
Hma1.2p1_1415F.1_g281950 Hydrangea macrophylla
Hma1.2p1_1789F.1_g302480 Hydrangea macrophylla
Hma1.2p1_2288F.1_g318950 Hydrangea macrophylla
Hma1.2p1_3282F.1_g334840 Hydrangea macrophylla
Hma1.2p1_3286F.1_g334890 Hydrangea macrophylla
HPP92_020071 Vanilla planifolia
HPP92_020079 Vanilla planifolia
Hund24214 Selenicereus undatus
Hund24220 Selenicereus undatus
Hund24225 Selenicereus undatus
Hund31009 Selenicereus undatus
Lalb_Chr04g0258261 Lupinus albus
Lalb_Chr17g0340551 Lupinus albus
Lj1A848T59 Lonicera japonica
Lj1g0009928 Lotus japonicus
Lj8A158G80 Lonicera japonica
Lsat_1_v5_gn_7_105060 Lactuca sativa
Lsat_1_v5_gn_9_57521 Lactuca sativa
Manes.12G076100 Manihot esculenta
Mapoly0044s0007 Marchantia polymorpha
MBI01_g15748_MAGBIO Magnolia biondii
MCO15G262 Micromonas commoda
MD03G1224000 Malus domestica
MD11G1241800 Malus domestica
Medtr1g012990 Medicago truncatula
Medtr7g069430 Medicago truncatula
MELO3C015338.2 Cucumis melo
MELO3C030248.2 Cucumis melo
MELO3C031483.2 Cucumis melo
MELO3C034411.2 Cucumis melo
Migut.H01924 Erythranthe guttata
Nitab4.5_0000677g0140 Nicotiana tabacum
Nitab4.5_0000826g0070 Nicotiana tabacum
Nitab4.5_0001618g0180 Nicotiana tabacum
Nn1g07032 Nelumbo nucifera
Oeu011677.2 Olea europaea
Oeu019344.1 Olea europaea
Os01g0148400 Oryza sativa ssp. japonica
Os02g0591800 Oryza sativa ssp. japonica
Peaxi162Scf00069g00118 Petunia axillaris
Peaxi162Scf00130g00826 Petunia axillaris
PGR083G2248 Punica granatum
PGSC0003DMG400012714 Solanum tuberosum
Phvul.001G137800 Phaseolus vulgaris
Phvul.001G137900 Phaseolus vulgaris
Phvul.001G138125 Phaseolus vulgaris
Phvul.008G022900 Phaseolus vulgaris
Phvul.008G022950 Phaseolus vulgaris
Phvul.008G023000 Phaseolus vulgaris
Phvul.011G077301 Phaseolus vulgaris
Potri.001G403100 Populus trichocarpa
Potri.011G122200 Populus trichocarpa
Pp3c16_10600 Physcomitrium patens
PRCOL_00005895 Prasinoderma coloniale
Prupe.4G185500 Prunus persica
Prupe.6G064500 Prunus persica
Prupe.7G132600 Prunus persica
Psat3g183280 Pisum sativum
Psat6g028560 Pisum sativum
Psat6g129960 Pisum sativum
PSO017G4384 Papaver somniferum
PSO170G0766 Papaver somniferum
PSO210G2253 Papaver somniferum
PSO832G4191 Papaver somniferum
QL03p010098 Quercus lobata
QL08p019759 Quercus lobata
RcHm_v2.0_Chr5g0034581 Rosa chinensis
Rhsim06G0196400 Rhododendron simsii
Sabra11G0108200 Salix brachista
Sabra16G0264800 Salix brachista
SalBow4G3038 Salvia bowleyana
SalBow6G0562 Salvia bowleyana
SalBow6G7052 Salvia bowleyana
Sc21g0001090 Simmondsia chinensis
Sed0008309 Sechium edule
Sed0012815 Sechium edule
SEGI_09483 Sequoiadendron giganteum
SEGI_35123 Sequoiadendron giganteum
SEGI_41466 Sequoiadendron giganteum
SGA_v2.0_scaffold9G04937 Striga asiatica
SMO353G0304 Selaginella moellendorffii
Solyc04g016380.3 Solanum lycopersicum
Sopen04g008470 Solanum pennellii
Sp1g39500 Schrenkiella parvula
Sp3g13710 Schrenkiella parvula
TAR624G0430 Trochodendron aralioides
TAR626G1243 Trochodendron aralioides
TAR627G0311 Trochodendron aralioides
THA.LOC104815549 Tarenaya hassleriana
THA.LOC104818062 Tarenaya hassleriana
Thecc.07G077100 Theobroma cacao
Thhalv10011666m.g Eutrema salsugineum
Thhalv10021159m.g Eutrema salsugineum
TPR.G10879 Trifolium pratense
TPR.G10880 Trifolium pratense
TPR.G27919 Trifolium pratense
TPR.G38897 Trifolium pratense
TPR.G685 Trifolium pratense
TWI38G2119 Tripterygium wilfordii
unitig_0.g2416 Utricularia gibba
vmacro11838 Vaccinium macrocarpon
vmacro19412 Vaccinium macrocarpon
VMungo1383G3569 Vigna mungo
Zm00001eb183430 Zea mays
Zm00001eb245760 Zea mays

User provided reference genes

Program Settings