Gene: Sabra11G0108200

General Information

Structural Information

  • Species Salix brachista
  • Gene Identifier Sabra11G0108200
  • Transcript Identifier Sabra11G0108200.1
  • Gene Type Coding gene
  • Location GWHAAZH00000011 : 16108850-16125068 : negative

Gene Family Information

  • ID HOM05D003434
  • #Genes/#Species 199/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sabra11G0108200.1
  • Accession GWHGAAZH018688
  • Accession GWHTAAZH018688

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene AT4G27440
GO:0009647
ISO
PLAZA Integrative Orthologyskotomorphogenesis AT5G54190
GO:0000027
ISO
PLAZA Integrative Orthologyribosomal large subunit assembly AT1G52930
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT5G54190
GO:0015995
ISO
PLAZA Integrative Orthologychlorophyll biosynthetic process AT4G27440
GO:0006364
IEA
InterProrRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G27440
GO:0005515
IEA
InterProprotein binding
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT4G27440
GO:0016630
IEA
InterProprotochlorophyllide reductase activity
GO:0019843
IEA
InterProrRNA binding
GO:0016491
IEA
InterProoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT4G27440
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G52930
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G27440
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT4G27440
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G52930
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT4G27440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR002347 Short-chain dehydrogenase/reductase SDR
IPR001680 WD40 repeat
IPR036291 NAD(P)-binding domain superfamily
IPR007109 Brix domain
IPR040324 WD repeat-containing protein WDR44/Dgr2
IPR005979 Light-dependent protochlorophyllide reductase
Mapman id Description
17.1.1.8.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.ITS1 rRNA removal.assembly factor (BRX1)
7.13.1.4.1 Coenzyme metabolism.chlorophyll metabolism.chlorophyll biosynthesis.protochlorophyllide oxidoreductase (POR) activities.light-dependent POR