Gene: Solyc04g016380.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g016380.3
  • Transcript Identifier Solyc04g016380.3.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 7228131-7232132 : negative

Gene Family Information

  • ID HOM05D003434
  • #Genes/#Species 199/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g016380.3.1
  • uniprot A0A3Q7G163
  • gene_id Solyc04g016380

Descriptions

  • Description Ribosome biogenesis protein BRX1-like protein (AHRD V3.3 *** A0A1U8GKR7_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0006364
IEA
InterProrRNA processing
GO:0000027
IBA
GOA Databaseribosomal large subunit assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019843
IEA
GOA DatabaserRNA binding
GO:0019843
IEA
InterProrRNA binding
GO:0003723
IBA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IBA
GOA Databasenucleolus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G52930

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR026532 Ribosome biogenesis protein BRX1
IPR007109 Brix domain
Mapman id Description
17.1.1.8.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.ITS1 rRNA removal.assembly factor (BRX1)