Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p33260 Brassica napus
A06p02000 Brassica napus
Aa31LG10G2720 Aethionema arabicum
Aa31LG8G3410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2120 Anthoceros agrestis
Actinidia21698 Actinidia chinensis
Actinidia32711 Actinidia chinensis
Ah.01g021810 Amaranthus hybridus
AL1G60260 Arabidopsis lyrata
AL3G29000 Arabidopsis lyrata
Aqoxy5G00790 Aquilegia oxysepala
Aqoxy7G01499 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MP8KIY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X5C2Q6 Arachis hypogaea
AT1G52160 Arabidopsis thaliana
AT3G16260 Arabidopsis thaliana
ATR0705G157 Amborella trichopoda
Atru.chr1.3468 Acer truncatum
AUR62022165 Chenopodium quinoa
AUR62024783 Chenopodium quinoa
AUR62031873 Chenopodium quinoa
AUR62032438 Chenopodium quinoa
AUR62032707 Chenopodium quinoa
BcaB01g03985 Brassica carinata
BcaB02g10013 Brassica carinata
BcaB06g25715 Brassica carinata
BcaC05g28901 Brassica carinata
BcaC08g43373 Brassica carinata
BcaC08g43502 Brassica carinata
BolC5t33776H Brassica oleracea
BolC6t35830H Brassica oleracea
BraA05t22151Z Brassica rapa
BraA06t23416Z Brassica rapa
C05p50250 Brassica napus
C06p07410 Brassica napus
CAN.G144.12 Capsicum annuum
CAN.G275.17 Capsicum annuum
CAN.G394.131 Capsicum annuum
CAN.G438.41 Capsicum annuum
CAN.G641.60 Capsicum annuum
CAN.G786.32 Capsicum annuum
CANSAT56G3441 Cannabis sativa
CANSAT80G0796 Cannabis sativa
CANSAT80G0873 Cannabis sativa
CARHR042320 Cardamine hirsuta
CARHR091470 Cardamine hirsuta
Carub.0001s4111 Capsella rubella
Carub.0003s1601 Capsella rubella
Ca_01149_v3 Cicer arietinum L.
CBR_g12605 Chara braunii
CBR_g8326 Chara braunii
Cc04_g02800 Coffea canephora
CDE05G0037 Ceratophyllum demersum
CDE05G0524 Ceratophyllum demersum
Cfa002112 Carpinus fangiana
Cfa022664 Carpinus fangiana
Ciclev10024815m.g Citrus clementina
CiPaw.01G233800 Carya illinoinensis
ClCG09G001800 Citrullus lanatus
COL.COLO4_08423 Corchorus olitorius
COL.COLO4_22674 Corchorus olitorius
COL.COLO4_29286 Corchorus olitorius
COL.COLO4_30471 Corchorus olitorius
Cpa.g.sc34.31 Carica papaya
Cre01.g039900 Chlamydomonas reinhardtii
Cre16.g680678 Chlamydomonas reinhardtii
CsaV3_7G033540 Cucumis sativus L.
CSS0002644 Camellia sinensis var. sinensis
CSS0038057 Camellia sinensis var. sinensis
CSS0038683 Camellia sinensis var. sinensis
CSS0045840 Camellia sinensis var. sinensis
DCAR_026337 Daucus carota
Dinv38001 Davidia involucrata
Duzib160G0509 Durio zibethinus
ECA232G0114 Erigeron canadensis
ECA248G0530 Erigeron canadensis
EL10Ac2g02463 Beta vulgaris
EL10Ac9g22044 Beta vulgaris
Eucgr.J02950 Eucalyptus grandis
FAN02G0192 Fragaria x ananassa
FAN05G1225 Fragaria x ananassa
FAN09G1082 Fragaria x ananassa
FAN09G1259 Fragaria x ananassa
FAN11G2504 Fragaria x ananassa
FAN14G1864 Fragaria x ananassa
FvH4_6g31990 Fragaria vesca
Glyma.13G356200 Glycine max
Glyma.15G017900 Glycine max
Gohir.A01G067100 Gossypium hirsutum
Gohir.A10G067100 Gossypium hirsutum
Gohir.D01G054332 Gossypium hirsutum
Gohir.D10G068200 Gossypium hirsutum
Gorai.002G074200 Gossypium raimondii
Gorai.011G072800 Gossypium raimondii
GSVIVG01017040001 Vitis vinifera
HanXRQChr09g0275951 Helianthus annuus
HanXRQChr16g0501281 Helianthus annuus
Haze_16335 Corylus avellana
Hma1.2p1_1689F.1_g297680 Hydrangea macrophylla
Hma1.2p1_1689F.1_g297710 Hydrangea macrophylla
HPP92_023817 Vanilla planifolia
Hund00661 Selenicereus undatus
Hund06647 Selenicereus undatus
Hund09088 Selenicereus undatus
Lalb_Chr22g0351451 Lupinus albus
Lalb_Chr24g0396021 Lupinus albus
Lj3g0015133 Lotus japonicus
Lj4A911T48 Lonicera japonica
Lj5C56T10 Lonicera japonica
Lj9C510G10 Lonicera japonica
Lsat_1_v5_gn_4_100861 Lactuca sativa
Manes.08G110200 Manihot esculenta
Manes.11G036300 Manihot esculenta
Mapoly0003s0137 Marchantia polymorpha
Mapoly0010s0126 Marchantia polymorpha
MBI04_g27074_MAGBIO Magnolia biondii
MCO04G482 Micromonas commoda
MD03G1197500 Malus domestica
MD17G1188100 Malus domestica
Medtr2g101390 Medicago truncatula
MELO3C024265.2 Cucumis melo
Migut.I00926 Erythranthe guttata
MSTRG.22654 Avicennia marina
Nitab4.5_0000571g0240 Nicotiana tabacum
Nitab4.5_0001147g0060 Nicotiana tabacum
Nitab4.5_0001147g0070 Nicotiana tabacum
Nitab4.5_0002424g0070 Nicotiana tabacum
Nitab4.5_0003039g0050 Nicotiana tabacum
Nitab4.5_0006202g0010 Nicotiana tabacum
Nitab4.5_0006515g0010 Nicotiana tabacum
Nitab4.5_0013558g0010 Nicotiana tabacum
Nn2g11635 Nelumbo nucifera
Nn2g11636 Nelumbo nucifera
Nn2g12597 Nelumbo nucifera
Oeu040356.1 Olea europaea
Oeu062565.1 Olea europaea
Oeu062570.2 Olea europaea
Os01g0232300 Oryza sativa ssp. japonica
Peaxi162Scf00015g00241 Petunia axillaris
Peaxi162Scf00034g00317 Petunia axillaris
Peaxi162Scf00772g00038 Petunia axillaris
Peaxi162Scf00772g00039 Petunia axillaris
Peaxi162Scf00772g00067 Petunia axillaris
Peaxi162Scf00772g00068 Petunia axillaris
Peaxi162Scf00772g00610 Petunia axillaris
PGR102G0722 Punica granatum
PGSC0003DMG400026462 Solanum tuberosum
PGSC0003DMG401002553 Solanum tuberosum
PGSC0003DMG402002553 Solanum tuberosum
Phvul.005G170100 Phaseolus vulgaris
Potri.001G186900 Populus trichocarpa
Pp3c14_3370 Physcomitrium patens
Pp3c18_12540 Physcomitrium patens
Pp3s169_60 Physcomitrium patens
PRCOL_00000971 Prasinoderma coloniale
Prupe.1G296500 Prunus persica
Prupe.3G063700 Prunus persica
Prupe.3G063800 Prunus persica
Prupe.6G337500 Prunus persica
Prupe.7G044400 Prunus persica
Psat1g100680 Pisum sativum
Psat2g178960 Pisum sativum
Psat5g297200 Pisum sativum
PSO017G5626 Papaver somniferum
PSO210G4271 Papaver somniferum
PSO210G6470 Papaver somniferum
PSO339G2930 Papaver somniferum
PSO384G3548 Papaver somniferum
PSO384G4173 Papaver somniferum
QL05p021182 Quercus lobata
RcHm_v2.0_Chr2g0139581 Rosa chinensis
Rhsim08G0225600 Rhododendron simsii
Sabra01G0153400 Salix brachista
SalBow2G0145 Salvia bowleyana
Sc12g0009560 Simmondsia chinensis
Sc12g0009670 Simmondsia chinensis
Sed0017993 Sechium edule
Sed0020980 Sechium edule
SEGI_01034 Sequoiadendron giganteum
SEGI_12386 Sequoiadendron giganteum
SEGI_37309 Sequoiadendron giganteum
SGA_v2.0_scaffold69G23353 Striga asiatica
SHI11014 Sapria himalayana
SHI11017 Sapria himalayana
SMO134G0187 Selaginella moellendorffii
SMO173G0095 Selaginella moellendorffii
SMO201G0121 Selaginella moellendorffii
Solyc03g120470.4 Solanum lycopersicum
Solyc10g079670.2 Solanum lycopersicum
Solyc12g044370.3 Solanum lycopersicum
Sopen00g008370 Solanum pennellii
Sopen00g010610 Solanum pennellii
Sopen10g030300 Solanum pennellii
Sopen12g022640 Solanum pennellii
Sp1g38720 Schrenkiella parvula
Sp3g14630 Schrenkiella parvula
TAR383G0500 Trochodendron aralioides
TAR626G0182 Trochodendron aralioides
TAR636G2661 Trochodendron aralioides
THA.LOC104817970 Tarenaya hassleriana
Thecc.06G095700 Theobroma cacao
Thhalv10011231m.g Eutrema salsugineum
Thhalv10019999m.g Eutrema salsugineum
TPR.G37248 Trifolium pratense
TWI12G1119 Tripterygium wilfordii
unitig_748.g8094 Utricularia gibba
unitig_748.g8095 Utricularia gibba
vmacro18872 Vaccinium macrocarpon
VMungo1080G0852 Vigna mungo
Zm00001eb339290 Zea mays

User provided reference genes

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