Gene: COL.COLO4_30471

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_30471
  • Transcript Identifier COL.rna29187
  • Gene Type Coding gene
  • Location AWUE01020733.1 : 16814-21338 : positive

Gene Family Information

  • ID HOM05D003266
  • #Genes/#Species 210/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna29187
  • GenBank OMO66621.1
  • id gene30443
  • gene_name COLO4_30471
  • uniprot A0A1R3H8F8

Descriptions

  • Description zinc phosphodiesterase ELAC protein 2-like protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0034414
IEA
GOA DatabasetRNA 3'-trailer cleavage, endonucleolytic
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0008033
IEA
InterProtRNA processing
GO:0042779
IEA
GOA DatabasetRNA 3'-trailer cleavage
GO:0042780
ISO
PLAZA Integrative OrthologytRNA 3'-end processing AT3G16260

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042781
IEA
GOA Database3'-tRNA processing endoribonuclease activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0016891
IEA
GOA Databaseendoribonuclease activity, producing 5'-phosphomonoesters

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like
IPR027794 tRNase Z endonuclease
Mapman id Description
16.6.1 RNA processing.ribonuclease activities.endoribonuclease (RNase Z)