Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p34740 Brassica napus
A10p22440 Brassica napus
Aa31LG11G12850 Aethionema arabicum
Aa31LG8G1930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3043 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3514 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1153__1154 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.222 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.225 Anthoceros agrestis
Actinidia16705 Actinidia chinensis
Actinidia17691 Actinidia chinensis
Actinidia21372 Actinidia chinensis
Actinidia29972 Actinidia chinensis
Actinidia38515 Actinidia chinensis
AL3G27010 Arabidopsis lyrata
AL6G27800 Arabidopsis lyrata
Aqoxy4G03221 Aquilegia oxysepala
Aqoxy7G02297 Aquilegia oxysepala
Aqoxy7G02720 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2W1DSR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.61N80Q Arachis hypogaea
AT3G14700 Arabidopsis thaliana
AT5G16780 Arabidopsis thaliana
ATR1098G045 Amborella trichopoda
Atru.chr1.2009 Acer truncatum
Atru.chr4.2711 Acer truncatum
AUR62018246 Chenopodium quinoa
AUR62034840 Chenopodium quinoa
BcaB06g25362 Brassica carinata
BcaC04g18847 Brassica carinata
BcaC04g18848 Brassica carinata
BcaC04g18849 Brassica carinata
BcaC05g29043 Brassica carinata
BolC5t33936H Brassica oleracea
BolC9t58862H Brassica oleracea
BraA05t22289Z Brassica rapa
BraA10t44303Z Brassica rapa
C05p52560 Brassica napus
C09p60290 Brassica napus
CAN.G1652.14 Capsicum annuum
CAN.G321.38 Capsicum annuum
CARHR196380 Cardamine hirsuta
CARHR196420 Cardamine hirsuta
Carub.0003s1438 Capsella rubella
Carub.0006s1500 Capsella rubella
Ca_13374_v3 Cicer arietinum L.
CBR_g32002 Chara braunii
CDE03G0251 Ceratophyllum demersum
CDE06G2045 Ceratophyllum demersum
Cfa015650 Carpinus fangiana
Ciclev10000233m.g Citrus clementina
CiPaw.02G097400 Carya illinoinensis
ClCG08G000490 Citrullus lanatus
ClCG08G000520 Citrullus lanatus
COL.COLO4_13873 Corchorus olitorius
COL.COLO4_17461 Corchorus olitorius
Cpa.g.sc115.47 Carica papaya
Cre03.g156100 Chlamydomonas reinhardtii
CsaV3_5G040300 Cucumis sativus L.
CSS0028609 Camellia sinensis var. sinensis
DCAR_019828 Daucus carota
Dinv09319 Davidia involucrata
Dinv19008 Davidia involucrata
Duzib213G0093 Durio zibethinus
Duzib268G1256 Durio zibethinus
ECA248G0244 Erigeron canadensis
ECA248G0833 Erigeron canadensis
EL10Ac6g15598 Beta vulgaris
Eucgr.G01007 Eucalyptus grandis
Eucgr.J03092 Eucalyptus grandis
Eucgr.L01432 Eucalyptus grandis
FAN07G0113 Fragaria x ananassa
FAN12G3728 Fragaria x ananassa
FAN15G1779 Fragaria x ananassa
FAN17G1371 Fragaria x ananassa
FAN20G2531 Fragaria x ananassa
FAN22G0104 Fragaria x ananassa
FAN27G2894 Fragaria x ananassa
FvH4_4g15641 Fragaria vesca
Glyma.07G220800 Glycine max
Glyma.08G229600 Glycine max
Glyma.15G216300 Glycine max
Gohir.A04G045600 Gossypium hirsutum
Gohir.D05G337200 Gossypium hirsutum
Gorai.009G361400 Gossypium raimondii
GSVIVG01035173001 Vitis vinifera
HanXRQChr09g0244631 Helianthus annuus
Haze_00894 Corylus avellana
Haze_07845 Corylus avellana
Haze_08784 Corylus avellana
Hma1.2p1_0148F.1_g066050 Hydrangea macrophylla
Hma1.2p1_0358F.1_g134820 Hydrangea macrophylla
Hma1.2p1_0765F.1_g215090 Hydrangea macrophylla
HPP92_003413 Vanilla planifolia
Hund17599 Selenicereus undatus
Lalb_Chr03g0032261 Lupinus albus
Lalb_Chr19g0130441 Lupinus albus
Lj1A444G10 Lonicera japonica
Lj1A444T9 Lonicera japonica
Lj2A813G14 Lonicera japonica
Lj2C819G2 Lonicera japonica
Lj3g0022607 Lotus japonicus
Lj6g0011042 Lotus japonicus
Lju445A0T12 Lonicera japonica
Lju445A0T13 Lonicera japonica
Lju445C0T0 Lonicera japonica
Lsat_1_v5_gn_1_54260 Lactuca sativa
Manes.16G074400 Manihot esculenta
Mapoly0063s0006 Marchantia polymorpha
MBI14_g36867_MAGBIO Magnolia biondii
MBI18_g28212_MAGBIO Magnolia biondii
MCO08G320 Micromonas commoda
MD07G1289000 Malus domestica
MD13G1193700 Malus domestica
MD16G1194300 Malus domestica
Medtr1g032020 Medicago truncatula
Medtr1g032350 Medicago truncatula
Medtr1g083910 Medicago truncatula
MELO3C022204.2 Cucumis melo
Migut.J00827 Erythranthe guttata
Migut.N01793 Erythranthe guttata
Nitab4.5_0002344g0060 Nicotiana tabacum
Nitab4.5_0004325g0020 Nicotiana tabacum
Nitab4.5_0004385g0020 Nicotiana tabacum
Nitab4.5_0014335g0020 Nicotiana tabacum
Nn5g27739 Nelumbo nucifera
Oeu011820.1 Olea europaea
Oeu028844.1 Olea europaea
Oeu058578.1 Olea europaea
Os02g0511500 Oryza sativa ssp. japonica
Peaxi162Scf00067g00244 Petunia axillaris
Peaxi162Scf00296g00051 Petunia axillaris
Peaxi162Scf00296g00721 Petunia axillaris
PGR031G3475 Punica granatum
PGSC0003DMG400007426 Solanum tuberosum
PGSC0003DMG400024746 Solanum tuberosum
Phvul.011G184800 Phaseolus vulgaris
Potri.001G082100 Populus trichocarpa
Potri.003G148501 Populus trichocarpa
Pp3c15_10170 Physcomitrium patens
PRCOL_00003741 Prasinoderma coloniale
Prupe.1G014100 Prunus persica
Psat0s3089g0040 Pisum sativum
Psat6g151960 Pisum sativum
PSO013G0353 Papaver somniferum
PSO063G3239 Papaver somniferum
PSO339G1389 Papaver somniferum
PSO339G6261 Papaver somniferum
QL03p023912 Quercus lobata
QL04p053119 Quercus lobata
QL05p063869 Quercus lobata
QL06p002249 Quercus lobata
QL06p002393 Quercus lobata
QL06p040345 Quercus lobata
QL09p029974 Quercus lobata
QL09p047982 Quercus lobata
QL09p049197 Quercus lobata
QL09p049204 Quercus lobata
QL09p049206 Quercus lobata
QL09p049212 Quercus lobata
QL11p041824 Quercus lobata
QL93p0157_0007 Quercus lobata
RcHm_v2.0_Chr1g0362521 Rosa chinensis
RcHm_v2.0_Chr1g0362531 Rosa chinensis
RcHm_v2.0_Chr1g0362541 Rosa chinensis
RcHm_v2.0_Chr4g0416151 Rosa chinensis
RcHm_v2.0_Chr4g0416161 Rosa chinensis
RcHm_v2.0_Chr7g0234901 Rosa chinensis
Rhsim01G0112900 Rhododendron simsii
Rhsim06G0182100 Rhododendron simsii
Rhsim06G0183100 Rhododendron simsii
SalBow3G1087 Salvia bowleyana
SalBow6G1591 Salvia bowleyana
SalBow6G1729 Salvia bowleyana
SalBow6G5333 Salvia bowleyana
SalBow6G5488 Salvia bowleyana
Sc22g0003580 Simmondsia chinensis
Sed0020388 Sechium edule
SEGI_01763 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12724 Striga asiatica
SMO111G0075 Selaginella moellendorffii
SMO111G0085 Selaginella moellendorffii
SMO351G0236 Selaginella moellendorffii
SMO361G0171 Selaginella moellendorffii
Solyc01g099380.4 Solanum lycopersicum
Solyc11g008460.1 Solanum lycopersicum
Solyc11g008470.2 Solanum lycopersicum
Sopen01g042940 Solanum pennellii
Sopen06g019980 Solanum pennellii
Sopen11g004250 Solanum pennellii
Sp3g12930 Schrenkiella parvula
Sp6g27340 Schrenkiella parvula
TAR381G1550 Trochodendron aralioides
TAR571G0002 Trochodendron aralioides
TAR625G1302 Trochodendron aralioides
Thecc.07G135300 Theobroma cacao
Thhalv10012684m.g Eutrema salsugineum
Thhalv10022422m.g Eutrema salsugineum
TPR.G2613 Trifolium pratense
TPR.G37958 Trifolium pratense
TWI32G0731 Tripterygium wilfordii
unitig_749.g14191 Utricularia gibba
unitig_749.g14192 Utricularia gibba
unitig_77.g31483 Utricularia gibba
vmacro00335 Vaccinium macrocarpon
vmacro13976 Vaccinium macrocarpon
vmacro19775 Vaccinium macrocarpon
vmacro19776 Vaccinium macrocarpon
VMungo1127G0135 Vigna mungo
VMungo1127G1632 Vigna mungo
Zm00001eb140630 Zea mays

User provided reference genes

Program Settings