Gene: Solyc11g008470.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g008470.2
- Transcript Identifier Solyc11g008470.2.1
- Gene Type Coding gene
- Location SL4.0ch11 : 2693118-2697052 : positive
Gene Family Information
- ID HOM05D003241
- #Genes/#Species 211/93
- Phylogenetic origin
- ID ORTHO05D003812
- #Genes/#Species 204/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc11g008470.2.1
- uniprot A0A3Q7IQD7
- gene_id Solyc11g008470
Descriptions
- Description SART-1 family protein DOT2 (AHRD V3.3 *** A0A1U8F4I8_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010087 | ISO | PLAZA Integrative Orthology | phloem or xylem histogenesis | AT5G16780 |
| GO:0048528 | ISO | PLAZA Integrative Orthology | post-embryonic root development | AT5G16780 |
| GO:0009933 | ISO | PLAZA Integrative Orthology | meristem structural organization | AT5G16780 |
| GO:0010305 | ISO | PLAZA Integrative Orthology | leaf vascular tissue pattern formation | AT5G16780 |
| GO:0010588 | ISO | PLAZA Integrative Orthology | cotyledon vascular tissue pattern formation | AT5G16780 |
| GO:0048366 | ISO | PLAZA Integrative Orthology | leaf development | AT5G16780 |
| GO:0048367 | ISO | PLAZA Integrative Orthology | shoot system development | AT5G16780 |
| GO:0009908 | ISO | PLAZA Integrative Orthology | flower development | AT5G16780 |
| GO:0000398 | IEA | GOA Database | mRNA splicing, via spliceosome | |
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome | |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT5G16780 |
| GO:0006865 | IEA | GOA Database | amino acid transport |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G16780 |
| GO:0005886 | IBA | GOA Database | plasma membrane | |
| GO:0005774 | IBA | GOA Database | vacuolar membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005011 | SNU66/SART1 family |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |