Gene: Sopen11g004250

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g004250
  • Transcript Identifier Sopen11g004250.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 2724260-2731811 : positive

Gene Family Information

  • ID HOM05D003241
  • #Genes/#Species 211/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g004250.1

Descriptions

  • Description Encodes a protein belonging to SART-1 family. The gene is expressed in the basal region of the developing embryo during heart stage. Phenotypic analyses of dot2 mutants suggest that this protein plays a role in root, shoot, and flower development. dot2 mutants are dwarved plants that display an aberrant spurred leaf venation pattern and fail to flower. In the roots DOT2 appears to be require for normal meristem organization and maintenance and the proper expression of PIN and PLT genes. | DEFECTIVELY ORGANIZED TRIBUTARIES 2 (DOT2) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: in 9 processes | LOCATED IN: nucleolus, nucleus | EXPRESSED IN: 31 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: SART-1 protein | BEST Arabidopsis thaliana protein match is: SART-1 family
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G16780
GO:0010087
ISO
PLAZA Integrative Orthologyphloem or xylem histogenesis AT5G16780
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT5G16780
GO:0048367
ISO
PLAZA Integrative Orthologyshoot system development AT5G16780
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT5G16780
GO:0010588
ISO
PLAZA Integrative Orthologycotyledon vascular tissue pattern formation AT5G16780
GO:0010305
ISO
PLAZA Integrative Orthologyleaf vascular tissue pattern formation AT5G16780
GO:0009933
ISO
PLAZA Integrative Orthologymeristem structural organization AT5G16780
GO:0048528
ISO
PLAZA Integrative Orthologypost-embryonic root development AT5G16780

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G16780
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G16780

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005011 SNU66/SART1 family
Mapman id Description
35.1 not assigned.annotated