Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p40240 Brassica napus
Aa31LG2G4270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4924 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4925 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4926 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4927 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2228 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.939 Anthoceros agrestis
Actinidia06098 Actinidia chinensis
Actinidia17342 Actinidia chinensis
Actinidia17343 Actinidia chinensis
Actinidia17346 Actinidia chinensis
Actinidia17348 Actinidia chinensis
Actinidia38773 Actinidia chinensis
Actinidia38774 Actinidia chinensis
Ah.10g031620 Amaranthus hybridus
AL43U10030 Arabidopsis lyrata
AL8G21600 Arabidopsis lyrata
Aqoxy293s003 Aquilegia oxysepala
Aqoxy5G00799 Aquilegia oxysepala
Aqoxy5G00921 Aquilegia oxysepala
Aqoxy6G02361 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.R713I2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WKF5J8 Arachis hypogaea
AT3G28925 Arabidopsis thaliana
AT5G48600 Arabidopsis thaliana
ATR0605G313 Amborella trichopoda
Atru.chr8.162 Acer truncatum
Atru.chr8.243 Acer truncatum
AUR62029891 Chenopodium quinoa
AUR62034416 Chenopodium quinoa
AUR62039793 Chenopodium quinoa
AUR62043038 Chenopodium quinoa
BcaB02g07150 Brassica carinata
BcaC06g33656 Brassica carinata
BolC7t44308H Brassica oleracea
BraA06t26939Z Brassica rapa
C07p37860 Brassica napus
CAN.G206.153 Capsicum annuum
CANSAT64G2675 Cannabis sativa
CARHR037400 Cardamine hirsuta
Carub.0005s0749 Capsella rubella
Ca_22432_v3 Cicer arietinum L.
CBR_g17940 Chara braunii
Cc07_g03380 Coffea canephora
CDE04G2390 Ceratophyllum demersum
Cfa007554 Carpinus fangiana
Cfa022148 Carpinus fangiana
Cfa022719 Carpinus fangiana
Ciclev10010934m.g Citrus clementina
CiPaw.03G026400 Carya illinoinensis
CiPaw.03G026500 Carya illinoinensis
CiPaw.03G026700 Carya illinoinensis
ClCG11G000030 Citrullus lanatus
COL.COLO4_33309 Corchorus olitorius
Cpa.g.sc140.54 Carica papaya
Cre12.g493400 Chlamydomonas reinhardtii
Cre14.g627500 Chlamydomonas reinhardtii
CsaV3_5G027630 Cucumis sativus L.
CSS0044326 Camellia sinensis var. sinensis
DCAR_025375 Daucus carota
Dinv02782 Davidia involucrata
Dinv05916 Davidia involucrata
Dinv05919 Davidia involucrata
Dinv09231 Davidia involucrata
Dinv15322 Davidia involucrata
Dinv33760 Davidia involucrata
Duzib187G0629 Durio zibethinus
ECA246G4217 Erigeron canadensis
EL10Ac2g02987 Beta vulgaris
Eucgr.I01943 Eucalyptus grandis
FAN13G2771 Fragaria x ananassa
FAN15G3277 Fragaria x ananassa
FAN18G4273 Fragaria x ananassa
FAN20G3149 Fragaria x ananassa
FAN27G0501 Fragaria x ananassa
FAN27G0753 Fragaria x ananassa
FvH4_2g39941 Fragaria vesca
FvH4_4g18080 Fragaria vesca
FvH4_5g30910 Fragaria vesca
FvH4_6g23280 Fragaria vesca
Glyma.03G087801 Glycine max
Glyma.09G098100 Glycine max
Glyma.13G062800 Glycine max
Glyma.15G194701 Glycine max
Glyma.19G022800 Glycine max
Gohir.A09G016100 Gossypium hirsutum
Gohir.D09G014800 Gossypium hirsutum
Gorai.006G016800 Gossypium raimondii
GSVIVG01011402001 Vitis vinifera
GSVIVG01011403001 Vitis vinifera
GSVIVG01011404001 Vitis vinifera
GSVIVG01011408001 Vitis vinifera
HanXRQChr02g0032161 Helianthus annuus
HanXRQChr03g0086531 Helianthus annuus
HanXRQChr15g0473961 Helianthus annuus
HanXRQChr16g0514911 Helianthus annuus
Haze_14528 Corylus avellana
Hma1.2p1_0409F.1_g146951 Hydrangea macrophylla
HPP92_015724 Vanilla planifolia
Hund08915 Selenicereus undatus
Lalb_Chr21g0318701 Lupinus albus
Lj4g0003862 Lotus japonicus
Lj7C393G0 Lonicera japonica
Lsat_1_v5_gn_3_101601 Lactuca sativa
Manes.02G046500 Manihot esculenta
Manes.07G039648 Manihot esculenta
Manes.11G018150 Manihot esculenta
Manes.18G107600 Manihot esculenta
Mapoly0189s0011 Marchantia polymorpha
MBI01_g32851_MAGBIO Magnolia biondii
MBI01_g44235_MAGBIO Magnolia biondii
MBI02_g15129_MAGBIO Magnolia biondii
MBI08_g05060_MAGBIO Magnolia biondii
MBI08_g11766_MAGBIO Magnolia biondii
MBI08_g18897_MAGBIO Magnolia biondii
MBI09_g43374_MAGBIO Magnolia biondii
MBI10_g28193_MAGBIO Magnolia biondii
MBI12_g26944_MAGBIO Magnolia biondii
MBI13_g40621_MAGBIO Magnolia biondii
MBI15_g03045_MAGBIO Magnolia biondii
MBI15_g09156_MAGBIO Magnolia biondii
MBI15_g46791_MAGBIO Magnolia biondii
MBI16_g17270_MAGBIO Magnolia biondii
MBI16_g38291_MAGBIO Magnolia biondii
MBI18_g02834_MAGBIO Magnolia biondii
MBI18_g21100_MAGBIO Magnolia biondii
MBI19_g02391_MAGBIO Magnolia biondii
MCO09G434 Micromonas commoda
MD02G1198100 Malus domestica
Medtr7g091420 Medicago truncatula
Medtr7g091430 Medicago truncatula
Medtr8g072890 Medicago truncatula
MELO3C022910.2 Cucumis melo
MELO3C034516.2 Cucumis melo
Migut.H00924 Erythranthe guttata
Nitab4.5_0000274g0210 Nicotiana tabacum
Nitab4.5_0004308g0020 Nicotiana tabacum
Nitab4.5_0026203g0010 Nicotiana tabacum
Nn4g25634 Nelumbo nucifera
Oeu035695.1 Olea europaea
Oeu039527.1 Olea europaea
Oeu062107.2 Olea europaea
Os05g0497150 Oryza sativa ssp. japonica
Peaxi162Scf00011g02911 Petunia axillaris
Peaxi162Scf00129g00132 Petunia axillaris
Peaxi162Scf00400g00051 Petunia axillaris
PGR004G1048 Punica granatum
PGR044G0718 Punica granatum
PGSC0003DMG400001326 Solanum tuberosum
PGSC0003DMG400006628 Solanum tuberosum
PGSC0003DMG400013212 Solanum tuberosum
PGSC0003DMG400043288 Solanum tuberosum
Phvul.004G029000 Phaseolus vulgaris
Potri.017G083200 Populus trichocarpa
Pp3c18_16050 Physcomitrium patens
PRCOL_00002234 Prasinoderma coloniale
Prupe.3G267300 Prunus persica
Psat4g106040 Pisum sativum
PSO017G5293 Papaver somniferum
PSO170G5698 Papaver somniferum
PSO330G0001 Papaver somniferum
QL02p063973 Quercus lobata
QL11p027129 Quercus lobata
QL11p027141 Quercus lobata
QL11p027662 Quercus lobata
QL12p008948 Quercus lobata
RcHm_v2.0_Chr5g0005951 Rosa chinensis
RcHm_v2.0_Chr5g0008421 Rosa chinensis
RcHm_v2.0_Chr5g0008461 Rosa chinensis
RcHm_v2.0_Chr6g0300801 Rosa chinensis
RcHm_v2.0_Chr7g0223681 Rosa chinensis
RcHm_v2.0_Chr7g0223741 Rosa chinensis
RcHm_v2.0_Chr7g0226461 Rosa chinensis
Rhsim07G0120700 Rhododendron simsii
Rhsim10G0039000 Rhododendron simsii
Sabra17G0073700 Salix brachista
SalBow1G4412 Salvia bowleyana
SalBow1G6091 Salvia bowleyana
Sc14g0005870 Simmondsia chinensis
Sed0006229 Sechium edule
Sed0013037 Sechium edule
SEGI_12690 Sequoiadendron giganteum
SEGI_13330 Sequoiadendron giganteum
SEGI_24334 Sequoiadendron giganteum
SEGI_31667 Sequoiadendron giganteum
SEGI_35467 Sequoiadendron giganteum
SEGI_40307 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00329 Striga asiatica
SGA_v2.0_scaffold499G52482 Striga asiatica
SHI25915 Sapria himalayana
Solyc02g067290.3 Solanum lycopersicum
Solyc02g067300.2 Solanum lycopersicum
Solyc02g087980.3 Solanum lycopersicum
Sopen02g032720 Solanum pennellii
Sp2g17560 Schrenkiella parvula
TAR375G0513 Trochodendron aralioides
TAR376G0649 Trochodendron aralioides
TAR381G0539 Trochodendron aralioides
THA.LOC104805468 Tarenaya hassleriana
Thecc.04G082300 Theobroma cacao
Thhalv10003529m.g Eutrema salsugineum
TPR.G36529 Trifolium pratense
TWI34G0415 Tripterygium wilfordii
unitig_899.g15524 Utricularia gibba
vmacro02215 Vaccinium macrocarpon
vmacro05461 Vaccinium macrocarpon
vmacro05694 Vaccinium macrocarpon
VMungo0464G1600 Vigna mungo
Zm00001eb212290 Zea mays
Zm00001eb281440 Zea mays
Zm00001eb291710 Zea mays

User provided reference genes

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