Gene: COL.COLO4_33309
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_33309
- Transcript Identifier COL.rna32011
- Gene Type Coding gene
- Location AWUE01021538.1 : 5283-14344 : positive
Gene Family Information
- ID HOM05D003226
- #Genes/#Species 212/98
- Phylogenetic origin
- ID ORTHO05D005723
- #Genes/#Species 153/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna32011
- GenBank OMO61875.1
- id gene33281
- gene_name COLO4_33309
- uniprot A0A1R3GUT3
Descriptions
- Description RecF/RecN/SMC
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0051321 | IEA | GOA Database | meiotic cell cycle | |
GO:0051276 | IEA | GOA Database | chromosome organization | |
GO:0051276 | IEA | InterPro | chromosome organization | |
GO:0007076 | ISO | PLAZA Integrative Orthology | mitotic chromosome condensation | AT5G48600 |
GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT5G48600 |
GO:0000070 | ISO | PLAZA Integrative Orthology | mitotic sister chromatid segregation | AT5G48600 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000166 | IEA | GOA Database | nucleotide binding | |
GO:0005524 | IEA | GOA Database | ATP binding | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0016887 | IEA | InterPro | ATP hydrolysis activity | |
GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005694 | IEA | GOA Database | chromosome | |
GO:0005694 | IEA | InterPro | chromosome |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR003395 | RecF/RecN/SMC, N-terminal |
IPR024704 | Structural maintenance of chromosomes protein |
IPR036277 | SMCs flexible hinge superfamily |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
IPR041738 | Structural maintenance of chromosomes 4, ABC domain, eukaryotic |
IPR010935 | SMCs flexible hinge |
Mapman id | Description |
---|---|
13.3.1.1.1 | Cell cycle organisation.mitosis and meiosis.chromatin condensation.condensin I/II complex.component CAP-C/SMC4 |