Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p08030 Brassica napus
A03p49130 Brassica napus
Aa31LG8G17700 Aethionema arabicum
Aa31LG9G1950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2600 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis
Actinidia23460 Actinidia chinensis
Actinidia23461 Actinidia chinensis
Actinidia23462 Actinidia chinensis
Actinidia40215 Actinidia chinensis
Actinidia40216 Actinidia chinensis
Ah.09g229980 Amaranthus hybridus
Ah.09g229990 Amaranthus hybridus
AL3G53900 Arabidopsis lyrata
AL7G40070 Arabidopsis lyrata
Aqoxy2G03201 Aquilegia oxysepala
Aqoxy5G00558 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6S26PP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EJ0XN1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L75CTN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q6K1JG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea
AT2G20790 Arabidopsis thaliana
AT4G15475 Arabidopsis thaliana
ATR0626G043 Amborella trichopoda
ATR0626G340 Amborella trichopoda
Atru.chr4.2693 Acer truncatum
AUR62021313 Chenopodium quinoa
AUR62033230 Chenopodium quinoa
BcaB01g05249 Brassica carinata
BcaC06g32936 Brassica carinata
BcaC06g33410 Brassica carinata
BolC3t13425H Brassica oleracea
BolC7t45238H Brassica oleracea
BraA03t10129Z Brassica rapa
BraA03t14008Z Brassica rapa
C03p09290 Brassica napus
C07p47170 Brassica napus
CAN.G1247.4 Capsicum annuum
CAN.G889.17 Capsicum annuum
CANSAT78G1359 Cannabis sativa
CANSAT78G1603 Cannabis sativa
CARHR111460 Cardamine hirsuta
CARHR222230 Cardamine hirsuta
CARHR222240 Cardamine hirsuta
Carub.0003s3536 Capsella rubella
Carub.0007s2643 Capsella rubella
Ca_00594_v3 Cicer arietinum L.
Ca_21567_v3 Cicer arietinum L.
CBR_g19730 Chara braunii
Cc03_g02810 Coffea canephora
Cc03_g02820 Coffea canephora
CDE05G1517 Ceratophyllum demersum
CDE11G0719 Ceratophyllum demersum
Cfa015544 Carpinus fangiana
Cfa015545 Carpinus fangiana
Ciclev10004552m.g Citrus clementina
Ciclev10004705m.g Citrus clementina
CiPaw.01G157200 Carya illinoinensis
CiPaw.01G157300 Carya illinoinensis
ClCG06G005650 Citrullus lanatus
ClCG06G005660 Citrullus lanatus
COL.COLO4_13977 Corchorus olitorius
COL.COLO4_13978 Corchorus olitorius
COL.COLO4_22600 Corchorus olitorius
COL.COLO4_28661 Corchorus olitorius
Cpa.g.c35915 Carica papaya
Cpa.g.c40554 Carica papaya
Cpa.g.sc16.61 Carica papaya
Cpa.g.sc2494.1 Carica papaya
Cre14.g624000 Chlamydomonas reinhardtii
CsaV3_6G005490 Cucumis sativus L.
CsaV3_6G005500 Cucumis sativus L.
CSS0016618 Camellia sinensis var. sinensis
CSS0031724 Camellia sinensis var. sinensis
CSS0038196 Camellia sinensis var. sinensis
CSS0041788 Camellia sinensis var. sinensis
CSS0041967 Camellia sinensis var. sinensis
CSS0044156 Camellia sinensis var. sinensis
DCAR_030580 Daucus carota
DCAR_030582 Daucus carota
Dinv38356 Davidia involucrata
Dinv44461 Davidia involucrata
Duzib052G0147 Durio zibethinus
Duzib052G0700 Durio zibethinus
Duzib151G0782 Durio zibethinus
Duzib212G0752 Durio zibethinus
ECA233G1162 Erigeron canadensis
ECA240G4644 Erigeron canadensis
EL10Ac8g18297 Beta vulgaris
Eucgr.B01185 Eucalyptus grandis
Eucgr.B01191 Eucalyptus grandis
Eucgr.F00974 Eucalyptus grandis
FAN07G1246 Fragaria x ananassa
FAN12G0174 Fragaria x ananassa
FAN12G3553 Fragaria x ananassa
FAN17G1900 Fragaria x ananassa
FAN17G2967 Fragaria x ananassa
FAN22G0551 Fragaria x ananassa
FAN22G0648 Fragaria x ananassa
FvH4_4g14000 Fragaria vesca
FvH4_4g14060 Fragaria vesca
Glyma.07G254400 Glycine max
Glyma.13G211600 Glycine max
Glyma.15G101100 Glycine max
Glyma.17G019800 Glycine max
Glyma.17G019900 Glycine max
Gohir.A09G231600 Gossypium hirsutum
Gohir.A09G231700 Gossypium hirsutum
Gohir.D09G232700 Gossypium hirsutum
Gohir.D09G232800 Gossypium hirsutum
Gorai.006G255600 Gossypium raimondii
Gorai.006G255700 Gossypium raimondii
GSVIVG01017858001 Vitis vinifera
GSVIVG01017859001 Vitis vinifera
HanXRQChr03g0079911 Helianthus annuus
HanXRQChr07g0192681 Helianthus annuus
HanXRQChr08g0226481 Helianthus annuus
HanXRQChr11g0325851 Helianthus annuus
HanXRQChr11g0325861 Helianthus annuus
HanXRQChr11g0325871 Helianthus annuus
Haze_01003 Corylus avellana
Haze_01004 Corylus avellana
Hma1.2p1_0511F.1_g169210 Hydrangea macrophylla
Hma1.2p1_2025F.1_g311500 Hydrangea macrophylla
HPP92_018399 Vanilla planifolia
Hund09035 Selenicereus undatus
Hund20659 Selenicereus undatus
Lalb_Chr07g0177471 Lupinus albus
Lalb_Chr18g0055921 Lupinus albus
Lalb_Chr20g0118281 Lupinus albus
Lj3C805G9 Lonicera japonica
Lj4g0021299 Lotus japonicus
Lj6A665G69 Lonicera japonica
Lj6g0020038 Lotus japonicus
Lsat_1_v5_gn_5_47620 Lactuca sativa
Lsat_1_v5_gn_6_14820 Lactuca sativa
Manes.03G187500 Manihot esculenta
Manes.03G187600 Manihot esculenta
Mapoly0055s0097 Marchantia polymorpha
MBI19_g15847_MAGBIO Magnolia biondii
MBI19_g20287_MAGBIO Magnolia biondii
MBI19_g20289_MAGBIO Magnolia biondii
MD12G1098700 Malus domestica
MD12G1098800 Malus domestica
MD13G1179000 Malus domestica
MD13G1179200 Malus domestica
MD13G1179300 Malus domestica
MD16G1180200 Malus domestica
MD16G1180300 Malus domestica
Medtr2g021030 Medicago truncatula
Medtr4g118010 Medicago truncatula
MELO3C021387.2 Cucumis melo
MELO3C021388.2 Cucumis melo
Migut.G00243 Erythranthe guttata
Migut.G00244 Erythranthe guttata
Migut.G00245 Erythranthe guttata
Migut.G00246 Erythranthe guttata
MSTRG.3975 Avicennia marina
MSTRG.3976 Avicennia marina
Nitab4.5_0000059g0110 Nicotiana tabacum
Nitab4.5_0000894g0020 Nicotiana tabacum
Nitab4.5_0002295g0030 Nicotiana tabacum
Nitab4.5_0002594g0070 Nicotiana tabacum
Nn1g08335 Nelumbo nucifera
Nn4g26133 Nelumbo nucifera
Nn4g26135 Nelumbo nucifera
Oeu017376.1 Olea europaea
Oeu035631.1 Olea europaea
Oeu042638.1 Olea europaea
Oeu056435.1 Olea europaea
Os08g0400800 Oryza sativa ssp. japonica
Os10g0148800 Oryza sativa ssp. japonica
Os11g0641200 Oryza sativa ssp. japonica
Os12g0528300 Oryza sativa ssp. japonica
Peaxi162Scf00095g00610 Petunia axillaris
Peaxi162Scf00769g00116 Petunia axillaris
PGR031G1661 Punica granatum
PGSC0003DMG400004529 Solanum tuberosum
PGSC0003DMG400030790 Solanum tuberosum
Phvul.003G097600 Phaseolus vulgaris
Phvul.003G097700 Phaseolus vulgaris
Phvul.006G157700 Phaseolus vulgaris
Potri.010G028600 Populus trichocarpa
Pp3c20_20750 Physcomitrium patens
Pp3c2_12250 Physcomitrium patens
Pp3c6_11940 Physcomitrium patens
Pp3c6_5440 Physcomitrium patens
Pp3c6_5960 Physcomitrium patens
Prupe.1G147800 Prunus persica
Prupe.1G147900 Prunus persica
Psat1g185320 Pisum sativum
Psat4g031200 Pisum sativum
PSO170G0016 Papaver somniferum
PSO210G2175 Papaver somniferum
PSO302G0133 Papaver somniferum
PSO832G0886 Papaver somniferum
QL06p006068 Quercus lobata
QL06p006121 Quercus lobata
RcHm_v2.0_Chr4g0419291 Rosa chinensis
RcHm_v2.0_Chr4g0419641 Rosa chinensis
Rhsim04G0212100 Rhododendron simsii
Rhsim04G0212200 Rhododendron simsii
Sabra10G0012300 Salix brachista
SalBow2G0360 Salvia bowleyana
SalBow2G3267 Salvia bowleyana
Sc19g0004700 Simmondsia chinensis
Sc19g0004720 Simmondsia chinensis
Sed0001779 Sechium edule
Sed0011257 Sechium edule
Sed0022901 Sechium edule
SEGI_13295 Sequoiadendron giganteum
SEGI_25743 Sequoiadendron giganteum
SEGI_28752 Sequoiadendron giganteum
SEGI_30175 Sequoiadendron giganteum
SGA_v2.0_scaffold237G43847 Striga asiatica
SGA_v2.0_scaffold237G43848 Striga asiatica
SMO115G0172 Selaginella moellendorffii
SMO228G0132 Selaginella moellendorffii
Solyc01g080360.3 Solanum lycopersicum
Solyc06g054430.1 Solanum lycopersicum
Solyc06g054440.2 Solanum lycopersicum
Sopen01g032170 Solanum pennellii
Sopen06g019510 Solanum pennellii
Sp6g27240 Schrenkiella parvula
Sp7g13700 Schrenkiella parvula
TAR362G1268 Trochodendron aralioides
TAR365G0003 Trochodendron aralioides
THA.LOC104802549 Tarenaya hassleriana
THA.LOC104802606 Tarenaya hassleriana
Thecc.04G271300 Theobroma cacao
Thecc.04G271400 Theobroma cacao
Thhalv10003762m.g Eutrema salsugineum
Thhalv10024700m.g Eutrema salsugineum
TPR.G18042 Trifolium pratense
TPR.G28123 Trifolium pratense
TWI09G0048 Tripterygium wilfordii
TWI09G1537 Tripterygium wilfordii
TWI53G0007 Tripterygium wilfordii
TWI73G1094 Tripterygium wilfordii
unitig_899.g14405 Utricularia gibba
vmacro08246 Vaccinium macrocarpon
vmacro08247 Vaccinium macrocarpon
VMungo0540G1770 Vigna mungo
VMungo1215G0498 Vigna mungo
VMungo1215G0792 Vigna mungo
VMungo1215G1507 Vigna mungo
Zm00001eb115300 Zea mays
Zm00001eb410820 Zea mays

User provided reference genes

Program Settings