Gene: AT4G15475

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G15475
  • Transcript Identifier AT4G15475.1
  • Gene Type Coding gene
  • Location Chr4 : 8845927-8848701 : positive

Gene Family Information

  • ID HOM05D002762
  • #Genes/#Species 250/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G15475.1
  • uniprot Q9C5D2

Descriptions

  • Description F-box/RNI-like superfamily protein
  • Computational description F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: EIN3-binding F box protein 2 (TAIR:AT5G25350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
TAS
Gene Ontologyubiquitin-dependent protein catabolic process1
GO:0006289
IMP
Gene Ontologynucleotide-excision repair2
GO:0010225
IMP
Gene Ontologyresponse to UV-C2
GO:0031146
IBA
Gene OntologySCF-dependent proteasomal ubiquitin-dependent protein catabolic process3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005634
IDA
Gene Ontologynucleus2
GO:0019005
IBA
Gene OntologySCF ubiquitin ligase complex3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032675 Leucine-rich repeat domain superfamily
IPR036047 F-box-like domain superfamily
IPR001810 F-box domain
IPR041567 COI1, F-box
IPR006553 Leucine-rich repeat, cysteine-containing subtype
IPR001611 Leucine-rich repeat
Mapman id Description
35.1 not assigned.annotated