Gene: Pp3c6_11940

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c6_11940
  • Transcript Identifier Pp3c6_11940V3.1
  • Gene Type Coding gene
  • Location Chr06 : 7718838-7721152 : negative

Gene Family Information

  • ID HOM05D002762
  • #Genes/#Species 250/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c6_11940V3.1
  • pacid 32976650
  • alias Phpat.006G043600
  • uniprot A0A2K1KFB5

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031146
IBA
GOA DatabaseSCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0006289
ISO
PLAZA Integrative Orthologynucleotide-excision repair AT4G15475
GO:0010225
ISO
PLAZA Integrative Orthologyresponse to UV-C AT4G15475
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT4G15475

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019005
IBA
GOA DatabaseSCF ubiquitin ligase complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G15475

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032675 Leucine-rich repeat domain superfamily
IPR041567 COI1, F-box
IPR036047 F-box-like domain superfamily
IPR006553 Leucine-rich repeat, cysteine-containing subtype
Mapman id Description
35.1 not assigned.annotated