Gene: AT2G20790

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G20790
  • Transcript Identifier AT2G20790.1
  • Gene Type Coding gene
  • Location Chr2 : 8950162-8952613 : negative

Gene Family Information

  • ID HOM05D002762
  • #Genes/#Species 250/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G20790.1
  • uniprot Q8W0Z6

Descriptions

  • Description clathrin adaptor complexes medium subunit family protein
  • Computational description clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968); Has 294 Blast hits to 294 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 151; Fungi - 30; Plants - 53; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
Gene Ontologyintracellular protein transport
GO:0016192
IEA
Gene Ontologyvesicle-mediated transport
GO:0016197
IBA
Gene Ontologyendosomal transport1
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D002762

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0030131
IEA
Gene Ontologyclathrin adaptor complex
GO:0005739
HDA
Gene Ontologymitochondrion2
GO:0005829
IBA
Gene Ontologycytosol1
GO:0005764
IBA
Gene Ontologylysosome1
GO:0030119
IBA
Gene OntologyAP-type membrane coat adaptor complex1
GO:0005770
IBA
Gene Ontologylate endosome1
GO:0030659
IEA
GOA Databasecytoplasmic vesicle membrane
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039591 AP-5 complex subunit mu-1
IPR028565 Mu homology domain
IPR036168 AP-2 complex subunit mu, C-terminal superfamily
Mapman id Description
22.3.1.6.3 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-5 cargo adaptor complex.medium subunit mu (AP5M)