Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p49800 Brassica napus
A05p40480 Brassica napus
A08p12210 Brassica napus
Aa31LG2G12470 Aethionema arabicum
Aa31LG5G18310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1354 Anthoceros agrestis
Actinidia07873 Actinidia chinensis
Actinidia11899 Actinidia chinensis
Actinidia11900 Actinidia chinensis
Actinidia16102 Actinidia chinensis
Actinidia39258 Actinidia chinensis
Ah.02g127560 Amaranthus hybridus
Ah.09g234030 Amaranthus hybridus
AL3G19100 Arabidopsis lyrata
AL7G38590 Arabidopsis lyrata
Aqoxy4G02248 Aquilegia oxysepala
Aqoxy4G02250 Aquilegia oxysepala
Aqoxy4G02808 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.51NNVX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AF3AF5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DJIM9Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SLGY42 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YJ4E0A Arachis hypogaea
AT3G07740 Arabidopsis thaliana
AT4G16420 Arabidopsis thaliana
ATR0624G088 Amborella trichopoda
Atru.chr1.2324 Acer truncatum
Atru.chr6.3378 Acer truncatum
Atru.chr6.3379 Acer truncatum
AUR62003037 Chenopodium quinoa
AUR62007843 Chenopodium quinoa
AUR62012830 Chenopodium quinoa
AUR62021827 Chenopodium quinoa
BcaC05g29567 Brassica carinata
BcaC07g37985 Brassica carinata
BcaC09g50341 Brassica carinata
BolC1t02592H Brassica oleracea
BolC1t02593H Brassica oleracea
BolC5t34613H Brassica oleracea
BolC7t45308H Brassica oleracea
BolC8t48366H Brassica oleracea
BraA03t14075Z Brassica rapa
BraA05t22781Z Brassica rapa
BraA07t28039Z Brassica rapa
BraA08t33237Z Brassica rapa
C01p26480 Brassica napus
C05p59580 Brassica napus
C07p47860 Brassica napus
CAN.G449.26 Capsicum annuum
CAN.G805.5 Capsicum annuum
CANSAT56G2485 Cannabis sativa
CANSAT64G0306 Cannabis sativa
CARHR082450 Cardamine hirsuta
CARHR222770 Cardamine hirsuta
Carub.0003s0732 Capsella rubella
Carub.0007s2511 Capsella rubella
Ca_00747_v3 Cicer arietinum L.
Ca_16347_v3 Cicer arietinum L.
Cc05_g01040 Coffea canephora
Cc09_g00570 Coffea canephora
CDE10G0364 Ceratophyllum demersum
CDE10G0762 Ceratophyllum demersum
Cfa000058 Carpinus fangiana
Cfa004798 Carpinus fangiana
Cfa024736 Carpinus fangiana
Ciclev10014755m.g Citrus clementina
Ciclev10014921m.g Citrus clementina
CiPaw.09G106700 Carya illinoinensis
CiPaw.09G151100 Carya illinoinensis
CiPaw.10G080000 Carya illinoinensis
ClCG01G010930 Citrullus lanatus
ClCG09G011020 Citrullus lanatus
COL.COLO4_06900 Corchorus olitorius
COL.COLO4_06902 Corchorus olitorius
COL.COLO4_27626 Corchorus olitorius
Cpa.g.c32944.1 Carica papaya
Cpa.g.c32944.2 Carica papaya
Cpa.g.sc27.246 Carica papaya
Cpa.g.sc27.248 Carica papaya
Cpa.g.sc27.249 Carica papaya
Cpa.g.sc27.250 Carica papaya
Cpa.g.sc4186.1 Carica papaya
Cpa.g.sc521.1 Carica papaya
Cpa.g.sc73.53 Carica papaya
Cpa.g.sc73.54 Carica papaya
Cre02.g089150 Chlamydomonas reinhardtii
CsaV3_1G015550 Cucumis sativus L.
CsaV3_7G021180 Cucumis sativus L.
CSS0003110 Camellia sinensis var. sinensis
CSS0012903 Camellia sinensis var. sinensis
CSS0031466 Camellia sinensis var. sinensis
DCAR_021095 Daucus carota
Dinv04404 Davidia involucrata
Dinv04405 Davidia involucrata
Dinv15367 Davidia involucrata
Dinv21285 Davidia involucrata
Dinv32706 Davidia involucrata
Duzib160G0097 Durio zibethinus
Duzib235G1030 Durio zibethinus
Duzib268G0509 Durio zibethinus
ECA234G4506 Erigeron canadensis
EL10Ac6g14644 Beta vulgaris
EL10Ac8g20241 Beta vulgaris
Eucgr.A01029 Eucalyptus grandis
Eucgr.E03886 Eucalyptus grandis
FAN02G3024 Fragaria x ananassa
FAN05G4360 Fragaria x ananassa
FAN09G4831 Fragaria x ananassa
FAN14G4030 Fragaria x ananassa
FAN21G0336 Fragaria x ananassa
FAN25G3424 Fragaria x ananassa
FvH4_3g00550 Fragaria vesca
FvH4_6g40730 Fragaria vesca
Glyma.09G012500 Glycine max
Glyma.13G005833 Glycine max
Glyma.13G006200 Glycine max
Glyma.15G117100 Glycine max
Glyma.20G062300 Glycine max
Gohir.A05G307600 Gossypium hirsutum
Gohir.A09G067900 Gossypium hirsutum
Gohir.D05G307900 Gossypium hirsutum
Gohir.D09G067900 Gossypium hirsutum
Gorai.006G082300 Gossypium raimondii
Gorai.009G328200 Gossypium raimondii
GSVIVG01003479001 Vitis vinifera
GSVIVG01030076001 Vitis vinifera
GSVIVG01030077001 Vitis vinifera
HanXRQChr12g0374021 Helianthus annuus
Haze_06993 Corylus avellana
Haze_10392 Corylus avellana
Hma1.2p1_0657F.1_g196880 Hydrangea macrophylla
Hma1.2p1_1963F.1_g309280 Hydrangea macrophylla
HPP92_020593 Vanilla planifolia
Hund01566 Selenicereus undatus
Hund21138 Selenicereus undatus
Lalb_Chr15g0088111 Lupinus albus
Lalb_Chr20g0119431 Lupinus albus
Lalb_Chr20g0119441 Lupinus albus
Lalb_Chr20g0119451 Lupinus albus
Lalb_Chr22g0360901 Lupinus albus
Lj2A258T36 Lonicera japonica
Lj6g0022085 Lotus japonicus
Lj6g0027934 Lotus japonicus
Lj8A135T98 Lonicera japonica
Lsat_1_v5_gn_5_121960 Lactuca sativa
Lsat_1_v5_gn_5_59261 Lactuca sativa
Lsat_1_v5_gn_8_78360 Lactuca sativa
Manes.05G167800 Manihot esculenta
Manes.09G078400 Manihot esculenta
Mapoly0029s0028 Marchantia polymorpha
MCO16G685 Micromonas commoda
MD00G1057900 Malus domestica
MD09G1125800 Malus domestica
MD09G1125900 Malus domestica
MD10G1336800 Malus domestica
MD17G1115800 Malus domestica
Medtr2g026310 Medicago truncatula
Medtr2g026380 Medicago truncatula
Medtr3g081360 Medicago truncatula
Medtr3g081380 Medicago truncatula
Medtr3g081390 Medicago truncatula
Medtr3g081410 Medicago truncatula
Medtr3g081420 Medicago truncatula
Medtr3g082790 Medicago truncatula
Medtr7g062030 Medicago truncatula
Medtr7g063290 Medicago truncatula
Medtr7g451720 Medicago truncatula
MELO3C013133.2 Cucumis melo
MELO3C026068.2 Cucumis melo
Migut.H01286 Erythranthe guttata
Migut.H01622 Erythranthe guttata
MSTRG.13110 Avicennia marina
MSTRG.14096 Avicennia marina
Nitab4.5_0001701g0100 Nicotiana tabacum
Nitab4.5_0002478g0030 Nicotiana tabacum
Nitab4.5_0005267g0010 Nicotiana tabacum
Nitab4.5_0008857g0030 Nicotiana tabacum
Nn1g03215 Nelumbo nucifera
Nn1g07479 Nelumbo nucifera
Oeu057032.1 Olea europaea
Oeu064359.1 Olea europaea
Os03g0750800 Oryza sativa ssp. japonica
Peaxi162Scf00576g00122 Petunia axillaris
Peaxi162Scf00802g00244 Petunia axillaris
PGR004G0233 Punica granatum
PGR042G1747 Punica granatum
PGSC0003DMG400008454 Solanum tuberosum
Phvul.006G140900 Phaseolus vulgaris
Phvul.007G120612 Phaseolus vulgaris
Potri.004G135400 Populus trichocarpa
Potri.006G017300 Populus trichocarpa
Potri.014G166300 Populus trichocarpa
Potri.016G007600 Populus trichocarpa
Pp3c10_25160 Physcomitrium patens
Pp3c23_12600 Physcomitrium patens
Pp3c24_3660 Physcomitrium patens
PRCOL_00001626 Prasinoderma coloniale
Prupe.3G198800 Prunus persica
Prupe.4G006600 Prunus persica
Prupe.6G340100 Prunus persica
Psat1g173600 Pisum sativum
Psat5g104200 Pisum sativum
PSO210G2029 Papaver somniferum
PSO302G0263 Papaver somniferum
PSO675G6828 Papaver somniferum
QL05p063137 Quercus lobata
QL05p068262 Quercus lobata
QL05p068766 Quercus lobata
RcHm_v2.0_Chr1g0367451 Rosa chinensis
RcHm_v2.0_Chr1g0367461 Rosa chinensis
RcHm_v2.0_Chr2g0156181 Rosa chinensis
RcHm_v2.0_Chr5g0000751 Rosa chinensis
Rhsim02G0091100 Rhododendron simsii
Rhsim04G0027300 Rhododendron simsii
Sabra06G0012300 Salix brachista
Sabra14G0126600 Salix brachista
Sabra16G0012400 Salix brachista
SalBow1G1444 Salvia bowleyana
Sc06g0009880 Simmondsia chinensis
Sed0003690 Sechium edule
Sed0012042 Sechium edule
SEGI_15743 Sequoiadendron giganteum
SEGI_30567 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18407 Striga asiatica
SGA_v2.0_scaffold89G27528 Striga asiatica
SHI10151 Sapria himalayana
SHI10152 Sapria himalayana
SMO134G0056 Selaginella moellendorffii
Solyc05g054200.4 Solanum lycopersicum
Solyc07g047610.3 Solanum lycopersicum
Sopen05g032680 Solanum pennellii
Sopen07g024090 Solanum pennellii
Sp3g06670 Schrenkiella parvula
Sp7g14950 Schrenkiella parvula
SpUn0522_0020 Schrenkiella parvula
TAR626G1638 Trochodendron aralioides
TAR627G0651 Trochodendron aralioides
THA.LOC104814482 Tarenaya hassleriana
THA.LOC104822433 Tarenaya hassleriana
Thecc.02G308600 Theobroma cacao
Thecc.06G237600 Theobroma cacao
Thecc.06G240800 Theobroma cacao
Thhalv10020436m.g Eutrema salsugineum
Thhalv10025039m.g Eutrema salsugineum
TPR.G10600 Trifolium pratense
TPR.G22468 Trifolium pratense
TWI36G1045 Tripterygium wilfordii
TWI53G1694 Tripterygium wilfordii
TWI77G0308 Tripterygium wilfordii
unitig_61.g26091 Utricularia gibba
unitig_62.g23256 Utricularia gibba
vmacro09484 Vaccinium macrocarpon
vmacro09486 Vaccinium macrocarpon
vmacro15735 Vaccinium macrocarpon
VMungo0540G0643 Vigna mungo
VMungo0540G2296 Vigna mungo
VMungo0540G2304 Vigna mungo
Zm00001eb057410 Zea mays
Zm00001eb214840 Zea mays

User provided reference genes

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