Gene: COL.COLO4_27626

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_27626
  • Transcript Identifier COL.rna26351
  • Gene Type Coding gene
  • Location AWUE01019647.1 : 21773-26471 : positive

Gene Family Information

  • ID HOM05D002647
  • #Genes/#Species 259/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna26351
  • GenBank OMO72417.1
  • id gene27598
  • gene_name COLO4_27626
  • uniprot A0A1R3HPR5

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
IEA
GOA Databasepositive regulation of transcription, DNA-templated
GO:0035065
IEA
GOA Databaseregulation of histone acetylation
GO:0035065
IEA
InterProregulation of histone acetylation
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G07740

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003713
IEA
GOA Databasetranscription coactivator activity
GO:0003713
IEA
InterProtranscription coactivator activity
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D002647
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G07740

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR016827 Transcriptional adaptor 2
IPR001005 SANT/Myb domain
IPR017930 Myb domain
IPR034318 Transcriptional adapter ADA2, plants
IPR041983 ADA2-like, zinc finger, ZZ-type
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
15.3.4.3.1.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.SAGA complex.HAT histone acetyltransferase module.component ADA2