Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p43970 Brassica napus
A04p08930 Brassica napus
A07p07330 Brassica napus
Aa31LG8G11310 Aethionema arabicum
Aa31LG9G4800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.500 Anthoceros agrestis
Actinidia09479 Actinidia chinensis
Actinidia23721 Actinidia chinensis
Actinidia28149 Actinidia chinensis
Actinidia28150 Actinidia chinensis
Actinidia28151 Actinidia chinensis
Actinidia28152 Actinidia chinensis
Actinidia28153 Actinidia chinensis
Actinidia37601 Actinidia chinensis
Actinidia39757 Actinidia chinensis
Actinidia39758 Actinidia chinensis
Actinidia39759 Actinidia chinensis
Actinidia39760 Actinidia chinensis
Actinidia39761 Actinidia chinensis
Actinidia39762 Actinidia chinensis
Actinidia39763 Actinidia chinensis
Actinidia39764 Actinidia chinensis
Actinidia39765 Actinidia chinensis
Ah.08g214370 Amaranthus hybridus
Ah.10g030220 Amaranthus hybridus
Ah.15g093990 Amaranthus hybridus
Ah.15g094000 Amaranthus hybridus
AL3G40640 Arabidopsis lyrata
AL6G38750 Arabidopsis lyrata
AL9U11010 Arabidopsis lyrata
Aqoxy5G01107_Aqoxy5G01108 Aquilegia oxysepala
Aqoxy6G02008 Aquilegia oxysepala
Aqoxy6G02098 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.23VDWQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.82MK2E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DAM61C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YQ4NC7 Arachis hypogaea
AT3G24870 Arabidopsis thaliana
AT3G24880 Arabidopsis thaliana
ATR0618G010 Amborella trichopoda
ATR0796G038 Amborella trichopoda
ATR0796G143 Amborella trichopoda
ATR0796G299 Amborella trichopoda
Atru.chr5.2101 Acer truncatum
Atru.chr5.2102 Acer truncatum
AUR62001094 Chenopodium quinoa
AUR62008919 Chenopodium quinoa
AUR62043690 Chenopodium quinoa
BcaB03g16110 Brassica carinata
BcaB06g26704 Brassica carinata
BcaB08g34428 Brassica carinata
BcaC01g03251 Brassica carinata
BcaC01g03285 Brassica carinata
BcaC02g09445 Brassica carinata
BcaC06g35765 Brassica carinata
BolC3t17684H Brassica oleracea
BolC3t17718H Brassica oleracea
BolC4t25848H Brassica oleracea
BolC7t41583H Brassica oleracea
BraA03t13528Z Brassica rapa
BraA04t16589Z Brassica rapa
BraA07t28522Z Brassica rapa
C03p54320 Brassica napus
C04p42820 Brassica napus
C07p06410 Brassica napus
C07p11110 Brassica napus
CAN.G15.7 Capsicum annuum
CAN.G15.8 Capsicum annuum
CAN.G771.81 Capsicum annuum
CANSAT01G2524 Cannabis sativa
CARHR101290 Cardamine hirsuta
CARHR218580 Cardamine hirsuta
Carub.0003s2526 Capsella rubella
Carub.0003s2528 Capsella rubella
Ca_26871_v3 Cicer arietinum L.
Cc01_g16950 Coffea canephora
CDE04G0039 Ceratophyllum demersum
CDE07G1586 Ceratophyllum demersum
Cfa002577 Carpinus fangiana
Ciclev10018446m.g Citrus clementina
CiPaw.03G148700 Carya illinoinensis
CiPaw.04G105000 Carya illinoinensis
ClCG09G008950 Citrullus lanatus
COL.COLO4_15677 Corchorus olitorius
Cpa.g.sc8.144 Carica papaya
Cpa.g.sc8.145 Carica papaya
Cre13.g605800 Chlamydomonas reinhardtii
CsaV3_7G026060 Cucumis sativus L.
CSS0031811 Camellia sinensis var. sinensis
CSS0046762 Camellia sinensis var. sinensis
CSS0048005 Camellia sinensis var. sinensis
CSS0049532 Camellia sinensis var. sinensis
CSS0050463 Camellia sinensis var. sinensis
DCAR_000525 Daucus carota
DCAR_012651 Daucus carota
DCAR_012652 Daucus carota
DCAR_018575 Daucus carota
Dinv12687 Davidia involucrata
Dinv19196 Davidia involucrata
Duzib133G0258 Durio zibethinus
Duzib138G1695 Durio zibethinus
Duzib211G0579 Durio zibethinus
ECA236G2127 Erigeron canadensis
ECA247G3882 Erigeron canadensis
ECA248G1308 Erigeron canadensis
EL10Ac7g17849 Beta vulgaris
Eucgr.H00795 Eucalyptus grandis
Eucgr.K02162 Eucalyptus grandis
FAN15G1468 Fragaria x ananassa
FAN24G2878 Fragaria x ananassa
FAN27G0734 Fragaria x ananassa
FvH4_2g18860 Fragaria vesca
Glyma.03G081300 Glycine max
Glyma.08G352600 Glycine max
Glyma.16G093800 Glycine max
Glyma.18G167833 Glycine max
Glyma.18G167866 Glycine max
Glyma.18G168966 Glycine max
Glyma.18G169600 Glycine max
Gohir.A02G073401 Gossypium hirsutum
Gohir.A07G156950 Gossypium hirsutum
Gohir.A07G157100 Gossypium hirsutum
Gohir.A07G201100 Gossypium hirsutum
Gohir.A08G194900 Gossypium hirsutum
Gohir.A11G137900 Gossypium hirsutum
Gohir.D07G163200 Gossypium hirsutum
Gohir.D07G207400 Gossypium hirsutum
Gohir.D08G212600 Gossypium hirsutum
Gohir.D11G144700 Gossypium hirsutum
Gorai.001G187100 Gossypium raimondii
Gorai.001G233800 Gossypium raimondii
Gorai.004G226000 Gossypium raimondii
Gorai.007G155000 Gossypium raimondii
GSVIVG01028685001 Vitis vinifera
HanXRQChr01g0015181 Helianthus annuus
HanXRQChr04g0108091 Helianthus annuus
HanXRQChr14g0445581 Helianthus annuus
Haze_24810 Corylus avellana
Hma1.2p1_0226F.1_g095630 Hydrangea macrophylla
HPP92_000535 Vanilla planifolia
HPP92_000536 Vanilla planifolia
HPP92_000545 Vanilla planifolia
HPP92_002818 Vanilla planifolia
HPP92_002819 Vanilla planifolia
Hund05562 Selenicereus undatus
Hund18389 Selenicereus undatus
Lalb_Chr01g0022291 Lupinus albus
Lalb_Chr03g0041701 Lupinus albus
Lalb_Chr19g0125651 Lupinus albus
Lj1A87T37 Lonicera japonica
Lj1g0019543 Lotus japonicus
Lj2C1130G3 Lonicera japonica
Lj3g0004121 Lotus japonicus
Lsat_1_v5_gn_5_146481 Lactuca sativa
Lsat_1_v5_gn_5_180401 Lactuca sativa
Lsat_1_v5_gn_7_62461 Lactuca sativa
Lsat_1_v5_gn_8_89820 Lactuca sativa
Manes.12G045400 Manihot esculenta
Manes.13G047100 Manihot esculenta
Mapoly0075s0051 Marchantia polymorpha
MBI18_g05075_MAGBIO Magnolia biondii
MBI18_g12534_MAGBIO Magnolia biondii
MD05G1174400 Malus domestica
MD10G1163500 Malus domestica
Medtr0340s0020 Medicago truncatula
Medtr7g056603 Medicago truncatula
MELO3C021029.2 Cucumis melo
Migut.D02520 Erythranthe guttata
Migut.N00620 Erythranthe guttata
Migut.N00621 Erythranthe guttata
MSTRG.12779 Avicennia marina
MSTRG.18000 Avicennia marina
Nitab4.5_0000045g0240 Nicotiana tabacum
Nitab4.5_0001564g0060 Nicotiana tabacum
Nitab4.5_0002223g0030 Nicotiana tabacum
Nitab4.5_0003758g0060 Nicotiana tabacum
Nn1g07877 Nelumbo nucifera
Oeu004073.1 Olea europaea
Oeu009720.1 Olea europaea
Oeu022247.1 Olea europaea
Oeu023092.1 Olea europaea
Oeu023095.1 Olea europaea
Os05g0593300 Oryza sativa ssp. japonica
Os05g0593550 Oryza sativa ssp. japonica
Os08g0177300 Oryza sativa ssp. japonica
Peaxi162Scf00081g00135 Petunia axillaris
Peaxi162Scf00517g00636 Petunia axillaris
PGR083G0125 Punica granatum
PGSC0003DMG400017665 Solanum tuberosum
PGSC0003DMG400039621 Solanum tuberosum
Phvul.008G126600 Phaseolus vulgaris
Phvul.010G018800 Phaseolus vulgaris
Potri.002G243350 Populus trichocarpa
Potri.002G243400 Populus trichocarpa
Potri.014G189900 Populus trichocarpa
Pp3c26_13270 Physcomitrium patens
Pp3c26_13274 Physcomitrium patens
Pp3c26_13460 Physcomitrium patens
Pp3c26_13463 Physcomitrium patens
Pp3c4_31630 Physcomitrium patens
Pp3c4_31860 Physcomitrium patens
Pp3c7_10800 Physcomitrium patens
Prupe.8G201800 Prunus persica
Psat0s1614g0080 Pisum sativum
Psat0s664g0040 Pisum sativum
Psat2g110360 Pisum sativum
Psat3g145600 Pisum sativum
Psat5g057400 Pisum sativum
PSO675G2169 Papaver somniferum
QL09p053994 Quercus lobata
RcHm_v2.0_Chr6g0284671 Rosa chinensis
Rhsim01G0255500 Rhododendron simsii
Rhsim13G0045600 Rhododendron simsii
Sabra02G0185300 Salix brachista
Sabra14G0142700 Salix brachista
SalBow3G0995 Salvia bowleyana
SalBow6G2694 Salvia bowleyana
SalBow6G7039 Salvia bowleyana
Sc05g0002110 Simmondsia chinensis
Sed0004451 Sechium edule
Sed0013250 Sechium edule
SGA_v2.0_scaffold3G01640 Striga asiatica
SGA_v2.0_scaffold6G03236 Striga asiatica
SHI31150 Sapria himalayana
SHI31151 Sapria himalayana
SHI31153 Sapria himalayana
SHI31155 Sapria himalayana
SMO308G0001 Selaginella moellendorffii
Solyc06g083420.3 Solanum lycopersicum
Solyc09g060080.4 Solanum lycopersicum
Sopen06g034780 Solanum pennellii
Sopen09g023690 Solanum pennellii
Sp3g22600 Schrenkiella parvula
Sp7g10520 Schrenkiella parvula
SpUn0027_0080 Schrenkiella parvula
TAR362G0009 Trochodendron aralioides
TAR633G2086 Trochodendron aralioides
THA.LOC104821651 Tarenaya hassleriana
Thecc.01G224600 Theobroma cacao
Thhalv10002368m.g Eutrema salsugineum
TPR.G31107 Trifolium pratense
TPR.G31394 Trifolium pratense
TWI18G0012 Tripterygium wilfordii
TWI36G1430 Tripterygium wilfordii
TWI36G1593 Tripterygium wilfordii
TWI75G1871 Tripterygium wilfordii
unitig_37.g12886 Utricularia gibba
unitig_37.g12887 Utricularia gibba
unitig_46.g18239 Utricularia gibba
unitig_736.g22339 Utricularia gibba
vmacro02763 Vaccinium macrocarpon
vmacro14750 Vaccinium macrocarpon
vmacro16364 Vaccinium macrocarpon
VMungo0331G0007 Vigna mungo
VMungo0720G1695 Vigna mungo
VMungo1383G0087 Vigna mungo
VMungo1383G1872 Vigna mungo
Zm00001eb160300 Zea mays
Zm00001eb160310 Zea mays
Zm00001eb345290 Zea mays

User provided reference genes

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