Gene: Solyc09g060080.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g060080.4
  • Transcript Identifier Solyc09g060080.4.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 53582115-53602506 : positive

Gene Family Information

  • ID HOM05D002628
  • #Genes/#Species 260/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g060080.4.1
  • uniprot A0A3Q7I2W1
  • gene_id Solyc09g060080

Descriptions

  • Description Helicase/SANT-associated DNA-binding protein (AHRD V3.3 *** A0A2K3NM86_TRIPR)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006325
IEA
GOA Databasechromatin organization
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT3G24880
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT3G24880
GO:0043981
ISO
PLAZA Integrative Orthologyhistone H4-K5 acetylation AT3G24880
GO:2000028
ISO
PLAZA Integrative Orthologyregulation of photoperiodism, flowering AT3G24870

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G24880

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035267
IEA
GOA DatabaseNuA4 histone acetyltransferase complex
GO:0035267
IEA
InterProNuA4 histone acetyltransferase complex
GO:0005634
IEA
GOA Databasenucleus
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT3G24870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR014012 Helicase/SANT-associated domain
IPR044798 Chromatin modification-related protein EAF1A/B
Mapman id Description
12.3.1.1.2.1 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.assembly platform.platform component EAF1