Gene: Sopen09g023690

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g023690
  • Transcript Identifier Sopen09g023690.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 67569446-67587415 : positive

Gene Family Information

  • ID HOM05D002628
  • #Genes/#Species 260/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g023690.1

Descriptions

  • Description Helicase/SANT-associated, DNA binding protein | FUNCTIONS IN: DNA binding | EXPRESSED IN: male gametophyte, pollen tube | EXPRESSED DURING: M germinated pollen stage | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , HSA , Homeodomain-like , HAS subgroup , Helicase/SANT-associated, DNA binding , MYB-like | BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT3G24880
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT3G24880
GO:0043981
ISO
PLAZA Integrative Orthologyhistone H4-K5 acetylation AT3G24880
GO:2000028
ISO
PLAZA Integrative Orthologyregulation of photoperiodism, flowering AT3G24870

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G24880

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035267
IEA
InterProNuA4 histone acetyltransferase complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G24880
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT3G24870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR014012 Helicase/SANT-associated domain
IPR044798 Chromatin modification-related protein EAF1A/B
Mapman id Description
12.3.1.1.2.1 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.assembly platform.platform component EAF1