Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p46360 Brassica napus
A08p23650 Brassica napus
A10p29050 Brassica napus
Aa31LG6G15920 Aethionema arabicum
Aa31LG7G14770 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.961 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.965 Anthoceros agrestis
Actinidia09837 Actinidia chinensis
Actinidia28439 Actinidia chinensis
Ah.02g122260 Amaranthus hybridus
AL2G17670 Arabidopsis lyrata
AL4G11070 Arabidopsis lyrata
AL7G11360 Arabidopsis lyrata
AL7G14580 Arabidopsis lyrata
Aqoxy5G02048 Aquilegia oxysepala
Aqoxy6G00399 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7P0AX4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8SK675 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A6MV6T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B79604 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K18NKD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RN34UY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.US9PJR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UWZ7BN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VC6QHQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WACD1A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YXXE35 Arachis hypogaea
AT2G21790 Arabidopsis thaliana
ATR0584G030 Amborella trichopoda
ATR0661G092 Amborella trichopoda
ATR0661G377 Amborella trichopoda
ATR0661G533 Amborella trichopoda
Atru.chr2.1904 Acer truncatum
Atru.chr2.1905 Acer truncatum
Atru.chr2.1906 Acer truncatum
Atru.chr4.687 Acer truncatum
Atru.chr4.688 Acer truncatum
AUR62003634 Chenopodium quinoa
AUR62017944 Chenopodium quinoa
BcaB01g05061 Brassica carinata
BcaB03g12258 Brassica carinata
BcaB03g16755 Brassica carinata
BcaB06g29062 Brassica carinata
BcaC04g19058 Brassica carinata
BcaC04g19061 Brassica carinata
BcaC06g32452 Brassica carinata
BcaC06g32453 Brassica carinata
BcaC06g34400 Brassica carinata
BcaC07g37184 Brassica carinata
BcaC07g40345 Brassica carinata
BolC3t20035H Brassica oleracea
BolC7t43447H Brassica oleracea
BolC8t50933H Brassica oleracea
BolC9t59139H Brassica oleracea
BolC9t59685H Brassica oleracea
BolC9t59686H Brassica oleracea
BraA06t27500Z Brassica rapa
BraA08t34320Z Brassica rapa
BraA10t44953Z Brassica rapa
C03p77790 Brassica napus
C07p29080 Brassica napus
C08p33320 Brassica napus
C09p69410 Brassica napus
CAN.G452.1 Capsicum annuum
CAN.G787.26 Capsicum annuum
CANSAT01G0772 Cannabis sativa
CARHR112810 Cardamine hirsuta
Carub.0004s0084 Capsella rubella
Carub.0004s0358 Capsella rubella
Carub.0007s0127 Capsella rubella
Ca_17670_v3 Cicer arietinum L.
CBR_g52642 Chara braunii
Cc07_g16740 Coffea canephora
CDE04G1837 Ceratophyllum demersum
CDE06G1922 Ceratophyllum demersum
CDE08G1521 Ceratophyllum demersum
CDE12G0017 Ceratophyllum demersum
Cfa002791 Carpinus fangiana
Cfa021061 Carpinus fangiana
Ciclev10000379m.g Citrus clementina
Ciclev10027252m.g Citrus clementina
Ciclev10030727m.g Citrus clementina
CiPaw.03G131100 Carya illinoinensis
CiPaw.04G088500 Carya illinoinensis
CiPaw.15G014200 Carya illinoinensis
COL.COLO4_03635 Corchorus olitorius
COL.COLO4_25324 Corchorus olitorius
COL.COLO4_38006 Corchorus olitorius
Cpa.g.sc72.46 Carica papaya
Cre12.g492950 Chlamydomonas reinhardtii
CsaV3_6G042080 Cucumis sativus L.
CSS0002003 Camellia sinensis var. sinensis
CSS0025674 Camellia sinensis var. sinensis
DCAR_000305 Daucus carota
DCAR_001390 Daucus carota
DCAR_001391 Daucus carota
DCAR_011466 Daucus carota
DCAR_011468 Daucus carota
Dinv04465 Davidia involucrata
Dinv19450 Davidia involucrata
Dinv41052 Davidia involucrata
Duzib116G0143 Durio zibethinus
Duzib147G0503 Durio zibethinus
ECA238G2599 Erigeron canadensis
EL10Ac6g15240 Beta vulgaris
Eucgr.H04893 Eucalyptus grandis
FAN19G0519 Fragaria x ananassa
FAN23G0033 Fragaria x ananassa
FAN26G1398 Fragaria x ananassa
FAN28G1920 Fragaria x ananassa
FvH4_1g23970 Fragaria vesca
Glyma.04G217300 Glycine max
Glyma.05G186900 Glycine max
Glyma.06G148500 Glycine max
Glyma.08G145350 Glycine max
Gohir.A02G137100 Gossypium hirsutum
Gohir.A11G223600 Gossypium hirsutum
Gohir.D03G047800 Gossypium hirsutum
Gohir.D11G226900 Gossypium hirsutum
Gorai.002G149900 Gossypium raimondii
Gorai.003G048900 Gossypium raimondii
GSVIVG01022278001 Vitis vinifera
HanXRQChr09g0253961 Helianthus annuus
HanXRQChr10g0282091 Helianthus annuus
HanXRQChr15g0493531 Helianthus annuus
Haze_17789 Corylus avellana
Haze_25088 Corylus avellana
Haze_26277 Corylus avellana
Hma1.2p1_0240F.1_g100440 Hydrangea macrophylla
Hma1.2p1_1688F.1_g297580 Hydrangea macrophylla
Hma1.2p1_1696F.1_g298050 Hydrangea macrophylla
HPP92_005743 Vanilla planifolia
HPP92_025030 Vanilla planifolia
Hund03501 Selenicereus undatus
Lalb_Chr01g0010221 Lupinus albus
Lalb_Chr08g0238751 Lupinus albus
Lalb_Chr13g0296351 Lupinus albus
Lj1g0023970 Lotus japonicus
Lj4A859T53 Lonicera japonica
Lj4g0012067 Lotus japonicus
Lj7A377G33 Lonicera japonica
Lsat_1_v5_gn_2_67320 Lactuca sativa
Lsat_1_v5_gn_3_140241 Lactuca sativa
Lsat_1_v5_gn_3_84080 Lactuca sativa
Lsat_1_v5_gn_4_138460 Lactuca sativa
Manes.02G181900 Manihot esculenta
Manes.12G146100 Manihot esculenta
Mapoly0028s0066 Marchantia polymorpha
MBI01_g28038_MAGBIO Magnolia biondii
MBI03_g20935_MAGBIO Magnolia biondii
MBI06_g08198_MAGBIO Magnolia biondii
MBI06_g21910_MAGBIO Magnolia biondii
MBI06_g24638_MAGBIO Magnolia biondii
MBI06_g27705_MAGBIO Magnolia biondii
MBI07_g39461_MAGBIO Magnolia biondii
MBI08_g17702_MAGBIO Magnolia biondii
MBI09_g15693_MAGBIO Magnolia biondii
MBI11_g27674_MAGBIO Magnolia biondii
MBI11_g32116_MAGBIO Magnolia biondii
MBI12_g26867_MAGBIO Magnolia biondii
MBI14_g17870_MAGBIO Magnolia biondii
MBI15_g15981_MAGBIO Magnolia biondii
MBI17_g42920_MAGBIO Magnolia biondii
MBI18_g02753_MAGBIO Magnolia biondii
MBI18_g23025_MAGBIO Magnolia biondii
MBI19_g13221_MAGBIO Magnolia biondii
MBI19_g19845_MAGBIO Magnolia biondii
MBI19_g47118_MAGBIO Magnolia biondii
MCO01G735 Micromonas commoda
MD01G1010100 Malus domestica
MD15G1339400 Malus domestica
Medtr3g009480 Medicago truncatula
Medtr8g092500 Medicago truncatula
Medtr8g092510 Medicago truncatula
MELO3C008017.2 Cucumis melo
MELO3C033293.2 Cucumis melo
Migut.D01689 Erythranthe guttata
Migut.H02462 Erythranthe guttata
MSTRG.23293 Avicennia marina
MSTRG.2516 Avicennia marina
Nitab4.5_0001728g0060 Nicotiana tabacum
Nitab4.5_0002334g0110 Nicotiana tabacum
Nitab4.5_0002577g0050 Nicotiana tabacum
Nitab4.5_0007495g0020 Nicotiana tabacum
Nitab4.5_0008290g0020 Nicotiana tabacum
Nn1g06035 Nelumbo nucifera
Nn5g28796 Nelumbo nucifera
Oeu001985.1 Olea europaea
Oeu015840.1 Olea europaea
Oeu028348.1 Olea europaea
Oeu054928.5 Olea europaea
Os02g0804900 Oryza sativa ssp. japonica
Os06g0168600 Oryza sativa ssp. japonica
Peaxi162Scf00025g03018 Petunia axillaris
Peaxi162Scf00569g00527 Petunia axillaris
PGR102G0981 Punica granatum
PGSC0003DMG400019692 Solanum tuberosum
PGSC0003DMG400023592 Solanum tuberosum
Phvul.002G267900 Phaseolus vulgaris
Phvul.009G115100 Phaseolus vulgaris
Potri.005G087300 Populus trichocarpa
Potri.005G194900 Populus trichocarpa
Potri.007G076700 Populus trichocarpa
Pp3c22_3180 Physcomitrium patens
Pp3c22_4130 Physcomitrium patens
Pp3c5_8430 Physcomitrium patens
Pp3c6_14810 Physcomitrium patens
PRCOL_00000724 Prasinoderma coloniale
Prupe.6G159900 Prunus persica
Prupe.8G037800 Prunus persica
Psat5g064360 Pisum sativum
Psat7g049120 Pisum sativum
Psat7g168800 Pisum sativum
PSO170G0722 Papaver somniferum
PSO541G3467 Papaver somniferum
PSO675G6883 Papaver somniferum
QL06p031282 Quercus lobata
RcHm_v2.0_Chr1g0314231 Rosa chinensis
RcHm_v2.0_Chr2g0120091 Rosa chinensis
RcHm_v2.0_Chr4g0385701 Rosa chinensis
Rhsim10G0144800 Rhododendron simsii
Sabra05G0072100 Salix brachista
Sabra05G0148400 Salix brachista
Sabra07G0064600 Salix brachista
SalBow6G1154 Salvia bowleyana
Sc03g0004700 Simmondsia chinensis
Sed0004819 Sechium edule
Sed0026219 Sechium edule
SEGI_03830 Sequoiadendron giganteum
SEGI_22970 Sequoiadendron giganteum
SEGI_23120 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01262 Striga asiatica
SGA_v2.0_scaffold51G18770 Striga asiatica
SHI11505 Sapria himalayana
SMO165G0049 Selaginella moellendorffii
SMO165G0111 Selaginella moellendorffii
SMO165G0154 Selaginella moellendorffii
Solyc04g012060.3 Solanum lycopersicum
Solyc04g051350.3 Solanum lycopersicum
Sopen04g006180 Solanum pennellii
Sopen04g022760 Solanum pennellii
Sopen08g013450 Solanum pennellii
Sp4g00930 Schrenkiella parvula
Sp7g36500 Schrenkiella parvula
TAR225G0003 Trochodendron aralioides
TAR381G1147 Trochodendron aralioides
TAR381G1560 Trochodendron aralioides
TAR625G0478 Trochodendron aralioides
TAR625G0539 Trochodendron aralioides
TAR628G0211 Trochodendron aralioides
TAR636G1480 Trochodendron aralioides
THA.LOC104807732 Tarenaya hassleriana
THA.LOC104824831 Tarenaya hassleriana
Thecc.01G117700 Theobroma cacao
Thecc.08G156300 Theobroma cacao
Thecc.08G156400 Theobroma cacao
Thhalv10000480m.g Eutrema salsugineum
Thhalv10024430m.g Eutrema salsugineum
Thhalv10027643m.g Eutrema salsugineum
TPR.G2199 Trifolium pratense
TPR.G25968 Trifolium pratense
TPR.G38778 Trifolium pratense
TPR.G40830 Trifolium pratense
TWI75G1590 Tripterygium wilfordii
unitig_899.g14591 Utricularia gibba
unitig_899.g14622 Utricularia gibba
unitig_899.g14623 Utricularia gibba
vmacro12871 Vaccinium macrocarpon
vmacro18647 Vaccinium macrocarpon
VMungo0251G3145 Vigna mungo
VMungo1309G2461 Vigna mungo
VMungo1309G3065 Vigna mungo
VMungo1383G0996 Vigna mungo
Zm00001eb271680 Zea mays
Zm00001eb375490 Zea mays

User provided reference genes

Program Settings