Gene: AT2G21790

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G21790
  • Transcript Identifier AT2G21790.1
  • Gene Type Coding gene
  • Location Chr2 : 9293529-9297580 : positive

Gene Family Information

  • ID HOM05D002467
  • #Genes/#Species 275/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G21790.1
  • symbol RNR1
  • Alias ATRNR1,RIBONUCLEOTIDE REDUCTASE LARGE SUBUNIT 1,CLS8,CRINKLY LEAVES 8,DPD2,defective in pollen organelle DNA degradation 2,R1,RIBONUCLEOTIDE REDUCTASE 1
  • uniprot Q9SJ20

Descriptions

  • Description ribonucleotide reductase 1
  • Computational description ribonucleotide reductase 1 (RNR1); FUNCTIONS IN: ribonucleoside-diphosphate reductase activity, ATP binding; INVOLVED IN: response to cadmium ion, DNA replication, deoxyribonucleoside triphosphate biosynthetic process; LOCATED IN: ribonucleoside-diphosphate reductase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase large subunit, N-terminal (InterPro:IPR013509), Ribonucleoside-diphosphate reductase, alpha subunit (InterPro:IPR013346), ATP-cone (InterPro:IPR005144), Ribonucleotide reductase large subunit, C-terminal (InterPro:IPR000788), Ribonucleotide reductase R1 subunit, N-terminal (InterPro:IPR008926); Has 15326 Blast hits to 14804 proteins in 2790 species: Archae - 206; Bacteria - 6388; Metazoa - 177; Fungi - 215; Plants - 88; Viruses - 606; Other Eukaryotes - 7646 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IMP
IEA
Gene OntologyDNA replication1
GO:0006260
IEA
InterProDNA replication
GO:0008152
IEA
GOA Databasemetabolic process
GO:0046686
IEP
GOA Databaseresponse to cadmium ion
GO:0009263
ISS, IBA
Gene Ontologydeoxyribonucleotide biosynthetic process2
GO:0009202
IMP
Gene Ontologydeoxyribonucleoside triphosphate biosynthetic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004748
IEA
GOA Databaseribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
GO:0004748
ISS, IBA
Gene Ontologyribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor2
GO:0004748
IEA
InterProribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IBA
Gene OntologyATP binding2
GO:0005524
IEA
InterProATP binding
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003824
IEA
GOA Databasecatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005971
IBA
Gene Ontologyribonucleoside-diphosphate reductase complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000788 Ribonucleotide reductase large subunit, C-terminal
IPR008926 Ribonucleotide reductase R1 subunit, N-terminal
IPR039718 Ribonucleoside-diphosphate reductase large subunit
IPR013346 Ribonucleotide reductase, class I , alpha subunit
IPR013509 Ribonucleotide reductase large subunit, N-terminal
IPR005144 ATP-cone domain
Mapman id Description
6.3.1.1.1 Nucleotide metabolism.deoxynucleotides.biosynthesis.ribonucleoside-diphosphate reductase heterodimer.large subunit